RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 H0Y3Z8 333 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 H3BNC9 293 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 ZBTB14O43829 449 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 FKTNO75072 461 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 GJB5O95377 273 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 WISP3O95389 354 aaPredicted RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 RPL17P18621 184 aaKnown RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 GLDCP23378 1020 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 ATP5C1P36542 298 aaKnown RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 NAGLUP54802 743 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 TECRLQ5HYJ1 363 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 TMC7Q7Z402 723 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 SCUBE1Q8IWY4 988 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 TXNDC5Q8NBS9 432 aaKnown RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 OR52K2Q8NGK3 314 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 GABPB2Q8TAK5 448 aaPredicted RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 OVCA2Q8WZ82 227 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 FAM161BQ96MY7 647 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 MRPL57Q9BQC6 102 aaKnown RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 TACO1Q9BSH4 297 aaKnown RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 UNC93B1Q9H1C4 597 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 BACE2Q9Y5Z0 518 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 A0A0D9SEW6 157 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 GRID2O43424 1007 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 KRT36O76013 467 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 FGF1P05230 155 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 HLA-DPA1P20036 260 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 PRDX6P30041 224 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 RPL14P50914 215 aaKnown RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 KPNA2P52292 529 aaKnown RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 SLC12A2P55011 1212 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 PRKAA1Q13131 559 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 BTG3Q14201 252 aaPredicted RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 ZNF235Q14590 738 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 NAA25Q14CX7 972 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 METTL21CQ5VZV1 264 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 NET1Q7Z628 596 aaPredicted RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 ULK2Q8IYT8 1036 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 PHTF2Q8N3S3 785 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 POU5F2Q8N7G0 328 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 PDZD8Q8NEN9 1154 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 PRICKLE1Q96MT3 831 aaPredicted RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 ZNF570Q96NI8 536 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 OR52B2Q96RD2 323 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 MAGEH1Q9H213 219 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 RETREG1Q9H6L5 497 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 MAN1C1Q9NR34 630 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 MARCH4Q9P2E8 410 aaPredicted RBP15.86■□□□□ 0.13
MBD1-227ENST00000592060 KCTD3Q9Y597 815 aa15.86■□□□□ 0.13
MBD1-227ENST00000592060 ANKRD36A6QL64 1941 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 ZNF840PA6NDX5 716 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 VGLL3A8MV65 326 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 CCL22O00626 93 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 HDAC3O15379 428 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 NPHS1O60500 1241 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 PQBP1O60828 265 aaKnown RBP15.85■□□□□ 0.13
MBD1-227ENST00000592060 PSMG1O95456 288 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 OR1D2P34982 312 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 COPAP53621 1224 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 DNAJB13P59910 316 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 GNA12Q03113 381 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 NSUN2Q08J23 767 aaKnown RBP eCLIP15.85■□□□□ 0.13
MBD1-227ENST00000592060 USP41Q3LFD5 358 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 HECTD2Q5U5R9 776 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 KLHDC10Q6PID8 442 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 PTAR1Q7Z6K3 402 aaPredicted RBP15.85■□□□□ 0.13
MBD1-227ENST00000592060 SPNS2Q8IVW8 549 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 LMNTD2Q8IXW0 634 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.85■□□□□ 0.13
MBD1-227ENST00000592060 OR7D4Q8NG98 312 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 AGR3Q8TD06 166 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 PDCD6IPQ8WUM4 868 aaKnown RBP15.85■□□□□ 0.13
MBD1-227ENST00000592060 ZNF296Q8WUU4 475 aaPredicted RBP15.85■□□□□ 0.13
MBD1-227ENST00000592060 HDAC10Q969S8 669 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 CLPTM1LQ96KA5 538 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 MGME1Q9BQP7 344 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 UNKQ9C0B0 810 aaKnown RBP15.85■□□□□ 0.13
MBD1-227ENST00000592060 CWH43Q9H720 699 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 TCF7L2Q9NQB0 619 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 ZDHHC2Q9UIJ5 367 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 ZFP37Q9Y6Q3 630 aaPredicted RBP15.85■□□□□ 0.13
MBD1-227ENST00000592060 ANAPC1Q9H1A4 1944 aa15.85■□□□□ 0.13
MBD1-227ENST00000592060 BPTFQ12830 3046 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 PLXNA4Q9HCM2 1894 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 E9PBE3 544 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 KLHL41O60662 606 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 SEC24AO95486 1093 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 S1PR4O95977 384 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 EPOP01588 193 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 HMGA1P17096 107 aaKnown RBP15.84■□□□□ 0.13
MBD1-227ENST00000592060 NCF2P19878 526 aaPredicted RBP15.84■□□□□ 0.13
MBD1-227ENST00000592060 TUFMP49411 452 aaKnown RBP15.84■□□□□ 0.13
MBD1-227ENST00000592060 CDH4P55283 916 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 MXRA7P84157 204 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 PFKPQ01813 784 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 ASPHQ12797 758 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 CSHL1Q14406 222 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 RCN1Q15293 331 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 FSCBQ5H9T9 825 aa15.84■□□□□ 0.13
MBD1-227ENST00000592060 SEL1L3Q68CR1 1132 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms