RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 FTH1P19P0C7X4 201 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 XPAP23025 273 aaPredicted RBP27.48■■□□□ 1.99
SMAD4-213ENST00000591914 SCNN1BP51168 640 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 ZNF235Q14590 738 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 TMEM52BQ4KMG9 183 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 CFAP58Q5T655 872 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 Q6ZSR6 202 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 KANSL1Q7Z3B3 1105 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 DCP2Q8IU60 420 aaKnown RBP27.48■■□□□ 1.99
SMAD4-213ENST00000591914 CXorf40AQ8TE69 158 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 NSMCE3Q96MG7 304 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 PCDH12Q9NPG4 1184 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 COL5A1P20908 1838 aaPredicted RBP27.48■■□□□ 1.99
SMAD4-213ENST00000591914 CHD8Q9HCK8 2581 aa27.48■■□□□ 1.99
SMAD4-213ENST00000591914 MMP20O60882 483 aa27.47■■□□□ 1.99
SMAD4-213ENST00000591914 CR2P20023 1033 aa27.47■■□□□ 1.99
SMAD4-213ENST00000591914 BCL2L1Q07817 233 aa27.47■■□□□ 1.99
SMAD4-213ENST00000591914 GALNT2Q10471 571 aa27.47■■□□□ 1.99
SMAD4-213ENST00000591914 BNIP3Q12983 259 aa27.47■■□□□ 1.99
SMAD4-213ENST00000591914 PGBD5Q8N414 524 aa27.47■■□□□ 1.99
SMAD4-213ENST00000591914 RAPGEF5Q92565 580 aa27.47■■□□□ 1.99
SMAD4-213ENST00000591914 CENPTQ96BT3 561 aa27.47■■□□□ 1.99
SMAD4-213ENST00000591914 MGME1Q9BQP7 344 aa27.47■■□□□ 1.99
SMAD4-213ENST00000591914 WRAP53Q9BUR4 548 aaKnown RBP27.47■■□□□ 1.99
SMAD4-213ENST00000591914 TOR4AQ9NXH8 423 aa27.47■■□□□ 1.99
SMAD4-213ENST00000591914 APOBEC2Q9Y235 224 aaKnown RBP27.47■■□□□ 1.99
SMAD4-213ENST00000591914 ACACBO00763 2458 aa27.47■■□□□ 1.99
SMAD4-213ENST00000591914 TRAFD1O14545 582 aaPredicted RBP27.46■■□□□ 1.99
SMAD4-213ENST00000591914 RIOK3O14730 519 aaKnown RBP27.46■■□□□ 1.99
SMAD4-213ENST00000591914 FPGTO14772 594 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 TM7SF2O76062 418 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 KDELR1P24390 212 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 MMP12P39900 470 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 GARSP41250 739 aaKnown RBP27.46■■□□□ 1.99
SMAD4-213ENST00000591914 ERAP2Q6P179 960 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 PTAR1Q7Z6K3 402 aaPredicted RBP27.46■■□□□ 1.99
SMAD4-213ENST00000591914 RAB44Q7Z6P3 723 aaPredicted RBP27.46■■□□□ 1.99
SMAD4-213ENST00000591914 SLCO6A1Q86UG4 719 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 CCDC170Q8IYT3 715 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 BBS5Q8N3I7 341 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 PQLC3Q8N755 202 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 NSMCE1Q8WV22 266 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 CNTNAP3BQ96NU0 1288 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 PANX2Q96RD6 677 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 NUDCD1Q96RS6 583 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 CNTNAP3Q9BZ76 1288 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 ATP8A1Q9Y2Q0 1164 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 SHROOM3Q8TF72 1996 aa27.46■■□□□ 1.99
SMAD4-213ENST00000591914 TPRP12270 2363 aaKnown RBP27.45■■□□□ 1.99
SMAD4-213ENST00000591914 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.45■■□□□ 1.98
SMAD4-213ENST00000591914 ZNF487B1APH4 448 aa27.45■■□□□ 1.98
SMAD4-213ENST00000591914 TNFSF14O43557 240 aa27.45■■□□□ 1.98
SMAD4-213ENST00000591914 HYAL3O43820 417 aaPredicted RBP27.45■■□□□ 1.98
SMAD4-213ENST00000591914 RABIFP47224 123 aa27.45■■□□□ 1.98
SMAD4-213ENST00000591914 MARC1Q5VT66 337 aa27.45■■□□□ 1.98
SMAD4-213ENST00000591914 LRRC38Q5VT99 294 aa27.45■■□□□ 1.98
SMAD4-213ENST00000591914 TEX26Q8N6G2 289 aa27.45■■□□□ 1.98
SMAD4-213ENST00000591914 ADAMTS14Q8WXS8 1223 aa27.45■■□□□ 1.98
SMAD4-213ENST00000591914 SPOCK2Q92563 424 aa27.45■■□□□ 1.98
SMAD4-213ENST00000591914 IFT43Q96FT9 208 aa27.45■■□□□ 1.98
SMAD4-213ENST00000591914 SCNM1Q9BWG6 230 aa27.45■■□□□ 1.98
SMAD4-213ENST00000591914 C1QTNF7Q9BXJ2 289 aa27.45■■□□□ 1.98
SMAD4-213ENST00000591914 DKK1O94907 266 aa27.44■■□□□ 1.98
SMAD4-213ENST00000591914 ATXN1LP0C7T5 689 aaKnown RBP27.44■■□□□ 1.98
SMAD4-213ENST00000591914 SPINK2P20155 84 aa27.44■■□□□ 1.98
SMAD4-213ENST00000591914 SLC1A1P43005 524 aa27.44■■□□□ 1.98
SMAD4-213ENST00000591914 MAGEA1P43355 309 aa27.44■■□□□ 1.98
SMAD4-213ENST00000591914 MMP13P45452 471 aa27.44■■□□□ 1.98
SMAD4-213ENST00000591914 HADHBP55084 474 aaKnown RBP27.44■■□□□ 1.98
SMAD4-213ENST00000591914 PFN3P60673 137 aa27.44■■□□□ 1.98
SMAD4-213ENST00000591914 ZFYVE27Q5T4F4 411 aa27.44■■□□□ 1.98
SMAD4-213ENST00000591914 VSIG1Q86XK7 387 aa27.44■■□□□ 1.98
SMAD4-213ENST00000591914 FATE1Q969F0 183 aa27.44■■□□□ 1.98
SMAD4-213ENST00000591914 RNF157Q96PX1 679 aa27.44■■□□□ 1.98
SMAD4-213ENST00000591914 FTSJ1Q9UET6 329 aa27.44■■□□□ 1.98
SMAD4-213ENST00000591914 LRRK1Q38SD2 2015 aa27.43■■□□□ 1.98
SMAD4-213ENST00000591914 SPTY2D1-AS1A0A0U1RR47 76 aa27.43■■□□□ 1.98
SMAD4-213ENST00000591914 TTC24A2A3L6 582 aaPredicted RBP27.43■■□□□ 1.98
SMAD4-213ENST00000591914 C3orf70A6NLC5 250 aaPredicted RBP27.43■■□□□ 1.98
SMAD4-213ENST00000591914 SOCS5O75159 536 aa27.43■■□□□ 1.98
SMAD4-213ENST00000591914 FECHP22830 423 aa27.43■■□□□ 1.98
SMAD4-213ENST00000591914 POLR2LP62875 67 aaKnown RBP27.43■■□□□ 1.98
SMAD4-213ENST00000591914 RALGPS1Q5JS13 557 aa27.43■■□□□ 1.98
SMAD4-213ENST00000591914 PNPLA1Q8N8W4 532 aa27.43■■□□□ 1.98
SMAD4-213ENST00000591914 TP53I13Q8NBR0 393 aaPredicted RBP27.43■■□□□ 1.98
SMAD4-213ENST00000591914 TSGA13Q96PP4 275 aa27.43■■□□□ 1.98
SMAD4-213ENST00000591914 NOD2Q9HC29 1040 aa27.43■■□□□ 1.98
SMAD4-213ENST00000591914 LRRD1A4D1F6 860 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 HTRA2O43464 458 aaPredicted RBP27.42■■□□□ 1.98
SMAD4-213ENST00000591914 SDC3O75056 442 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 PRKCGP05129 697 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 C6P13671 934 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 IGFALSP35858 605 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 GBE1Q04446 702 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 FZD2Q14332 565 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 IFI16Q16666 785 aaKnown RBP27.42■■□□□ 1.98
SMAD4-213ENST00000591914 KDM7AQ6ZMT4 941 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 CHCHD4Q8N4Q1 142 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 EID2Q8N6I1 236 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 MAML1Q92585 1016 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms