RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 DNAJC28Q9NX36 388 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 NCKIPSDQ9NZQ3 722 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 ADAM22Q9P0K1 906 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 DKK3Q9UBP4 350 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 KLF15Q9UIH9 416 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 SHROOM3Q8TF72 1996 aa10.55□□□□□ -0.72
VPS4B-207ENST00000591519 EME2A4GXA9 379 aaPredicted RBP10.54□□□□□ -0.72
VPS4B-207ENST00000591519 H3BM21 787 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 KRIT1O00522 736 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 SIAH2O43255 324 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 SPINT1O43278 529 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 CALB1P05937 261 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 GPD1P21695 349 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 GKP32189 559 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 NSFP46459 744 aaKnown RBP10.54□□□□□ -0.72
VPS4B-207ENST00000591519 LSSP48449 732 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 SUOXP51687 545 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 ZNF143P52747 638 aaPredicted RBP10.54□□□□□ -0.72
VPS4B-207ENST00000591519 AIF1P55008 147 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 YPEL5P62699 121 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 EIF2B5Q13144 721 aaKnown RBP10.54□□□□□ -0.72
VPS4B-207ENST00000591519 PDE1CQ14123 709 aaPredicted RBP10.54□□□□□ -0.72
VPS4B-207ENST00000591519 CLEC16AQ2KHT3 1053 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 FILIP1LQ4L180 1135 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 GDPD4Q6W3E5 623 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 KDM7AQ6ZMT4 941 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 TMC6Q7Z403 805 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 PTAR1Q7Z6K3 402 aaPredicted RBP10.54□□□□□ -0.72
VPS4B-207ENST00000591519 PHLDB2Q86SQ0 1253 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 TTC7BQ86TV6 843 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 UMODL1-AS1Q8N2C9 162 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 RTL3Q8N8U3 475 aaKnown RBP10.54□□□□□ -0.72
VPS4B-207ENST00000591519 C3orf20Q8ND61 904 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 ZNF548Q8NEK5 533 aaPredicted RBP10.54□□□□□ -0.72
VPS4B-207ENST00000591519 BTN2A2Q8WVV5 523 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 HIC2Q96JB3 615 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 ZNF578Q96N58 590 aaPredicted RBP10.54□□□□□ -0.72
VPS4B-207ENST00000591519 KLHL32Q96NJ5 620 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 CPEB1Q9BZB8 566 aaKnown RBP10.54□□□□□ -0.72
VPS4B-207ENST00000591519 TTYH3Q9C0H2 523 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 PTPRQQ9UMZ3 2332 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 RAI2Q9Y5P3 530 aa10.54□□□□□ -0.72
VPS4B-207ENST00000591519 NEMP1O14524 444 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 AQP9O43315 295 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 BUB1O43683 1085 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 NEBLO76041 1014 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 GJB6O95452 261 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 UGT2B4P06133 528 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 CCNYL3P0C7X3 344 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 MYF5P13349 255 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 TIMP2P16035 220 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 SH3BP2P78314 561 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 FANCCQ00597 558 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 RAD51Q06609 339 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 SERINC3Q13530 473 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 PTK2BQ14289 1009 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 LINC01559Q495D7 138 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 TPRG1LQ5T0D9 272 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 IGF2-ASQ6U949 168 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 MON1BQ7L1V2 547 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 RYBPQ8N488 228 aaPredicted RBP10.53□□□□□ -0.72
VPS4B-207ENST00000591519 OR6K2Q8NGY2 324 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 GDAP1L1Q96MZ0 367 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 DEPDC7Q96QD5 511 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 ERGIC2Q96RQ1 377 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 SELENOOQ9BVL4 669 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 ABCG4Q9H172 646 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 POLR1BQ9H9Y6 1135 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 SPASTQ9UBP0 616 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 IPO11Q9UI26 975 aaKnown RBP10.53□□□□□ -0.72
VPS4B-207ENST00000591519 PCDHB1Q9Y5F3 818 aa10.53□□□□□ -0.72
VPS4B-207ENST00000591519 SMG1Q96Q15 3661 aaKnown RBP10.53□□□□□ -0.72
VPS4B-207ENST00000591519 BPTFQ12830 3046 aa10.52□□□□□ -0.72
VPS4B-207ENST00000591519 ATXN7O15265 892 aaPredicted RBP10.52□□□□□ -0.73
VPS4B-207ENST00000591519 MMP20O60882 483 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 CSO75390 466 aaKnown RBP10.52□□□□□ -0.73
VPS4B-207ENST00000591519 TM7SF2O76062 418 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 TMCC1O94876 653 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 EPHB2P29323 1055 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 HTR7P34969 479 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 PEX5P50542 639 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 UBASH3AP57075 661 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 ERVPABLB-1P60509 514 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 TLE3Q04726 772 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 AGERQ15109 404 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 CYTH1Q15438 398 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 ISXQ2M1V0 245 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 PARP15Q460N3 678 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 TMEM52BQ4KMG9 183 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 EFHC2Q5JST6 749 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 ATXN7L2Q5T6C5 722 aaPredicted RBP10.52□□□□□ -0.73
VPS4B-207ENST00000591519 LEKR1Q6ZMV7 388 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 PYROXD2Q8N2H3 581 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 TP53I13Q8NBR0 393 aaPredicted RBP10.52□□□□□ -0.73
VPS4B-207ENST00000591519 ZNF248Q8NDW4 579 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 IFI44Q8TCB0 444 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 MAPK15Q8TD08 544 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 AGPAT1Q99943 283 aa10.52□□□□□ -0.73
VPS4B-207ENST00000591519 CNPY3Q9BT09 278 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms