RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 MICALL1Q8N3F8 863 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 NAT16Q8N8M0 369 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 CSGALNACT1Q8TDX6 532 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 STYXQ8WUJ0 223 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 SCG3Q8WXD2 468 aaKnown RBP13.1□□□□□ -0.31
PTBP1-216ENST00000590887 TLCD1Q96CP7 247 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 LRIG1Q96JA1 1093 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 ZNF641Q96N77 438 aaPredicted RBP13.1□□□□□ -0.31
PTBP1-216ENST00000590887 SMC6Q96SB8 1091 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 CPNE1Q99829 537 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 C19orf43Q9BQ61 176 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 FAM167BQ9BTA0 163 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 TDRD1Q9BXT4 1180 aaKnown RBP13.1□□□□□ -0.31
PTBP1-216ENST00000590887 CPEB1Q9BZB8 566 aaKnown RBP13.1□□□□□ -0.31
PTBP1-216ENST00000590887 TTYH1Q9H313 450 aaPredicted RBP13.1□□□□□ -0.31
PTBP1-216ENST00000590887 EPS15L1Q9UBC2 864 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 LHX3Q9UBR4 397 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 VCANP13611 3396 aa13.1□□□□□ -0.31
PTBP1-216ENST00000590887 ANKRD66B4E2M5 251 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 NPC1O15118 1278 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 MUSKO15146 869 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 CD160O95971 181 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 MT-ND3P03897 115 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 DLDP09622 509 aaKnown RBP13.09□□□□□ -0.31
PTBP1-216ENST00000590887 SRCP12931 536 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 SPRP35270 261 aaPredicted RBP13.09□□□□□ -0.31
PTBP1-216ENST00000590887 POLD2P49005 469 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 GRIN2CQ14957 1233 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 COL19A1Q14993 1142 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 SEPT7Q16181 437 aaKnown RBP13.09□□□□□ -0.31
PTBP1-216ENST00000590887 MYLK3Q32MK0 819 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 ITPRIPL2Q3MIP1 535 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 FUT11Q495W5 492 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 TSTD2Q5T7W7 516 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 KIAA0930Q6ICG6 404 aaPredicted RBP13.09□□□□□ -0.31
PTBP1-216ENST00000590887 C22orf39Q6P5X5 142 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 VITQ6UXI7 678 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 KDM7AQ6ZMT4 941 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 KCNMB4Q86W47 210 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 RIN3Q8TB24 985 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 SPOCK2Q92563 424 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 MSLNLQ96KJ4 702 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 WDR83Q9BRX9 315 aaKnown RBP13.09□□□□□ -0.31
PTBP1-216ENST00000590887 DHRS4Q9BTZ2 278 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 OSBPL1AQ9BXW6 950 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 EBF3Q9H4W6 596 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 CHRAC1Q9NRG0 131 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 C20orf96Q9NUD7 363 aaPredicted RBP13.09□□□□□ -0.31
PTBP1-216ENST00000590887 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.09□□□□□ -0.315e-6■□□□□ 8.2
PTBP1-216ENST00000590887 HECAQ9UBI9 543 aaPredicted RBP13.09□□□□□ -0.31
PTBP1-216ENST00000590887 TBK1Q9UHD2 729 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 INTS6Q9UL03 887 aaKnown RBP13.09□□□□□ -0.31
PTBP1-216ENST00000590887 CLEC4EQ9ULY5 219 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 PHTF1Q9UMS5 762 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 CHKBQ9Y259 395 aa13.09□□□□□ -0.31
PTBP1-216ENST00000590887 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 TBX10O75333 385 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 TULP3O75386 442 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 APODP05090 189 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 CISD3P0C7P0 127 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 FCARP24071 287 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 GDI1P31150 447 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 GP5P40197 560 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 CSE1LP55060 971 aaKnown RBP13.08□□□□□ -0.32
PTBP1-216ENST00000590887 PRAMEP78395 509 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 CRADDP78560 199 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 TAF1AQ15573 450 aaPredicted RBP13.08□□□□□ -0.32
PTBP1-216ENST00000590887 DLG2Q15700 870 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 TNFAIP8L3Q5GJ75 292 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 EMC10Q5UCC4 262 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 KIAA0408Q6ZU52 694 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 ADIPOR2Q86V24 386 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 AGGF1Q8N302 714 aaeCLIP13.08□□□□□ -0.32
PTBP1-216ENST00000590887 SMRP1Q8NCR6 262 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 BLOC1S5Q8TDH9 187 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 HCAR2Q8TDS4 363 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 PDCD6IPQ8WUM4 868 aaKnown RBP13.08□□□□□ -0.32
PTBP1-216ENST00000590887 MYO19Q96H55 970 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 ZNF419Q96HQ0 510 aaPredicted RBP13.08□□□□□ -0.32
PTBP1-216ENST00000590887 EXOC2Q96KP1 924 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 MYADMQ96S97 322 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 CDX2Q99626 313 aaPredicted RBP13.08□□□□□ -0.32
PTBP1-216ENST00000590887 CIPCQ9C0C6 399 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 MAGEE1Q9HCI5 957 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 SSU72Q9NP77 194 aaKnown RBP13.08□□□□□ -0.32
PTBP1-216ENST00000590887 PIH1D1Q9NWS0 290 aaKnown RBP13.08□□□□□ -0.32
PTBP1-216ENST00000590887 ELOVL2Q9NXB9 296 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 NKIRAS1Q9NYS0 192 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 SUN2Q9UH99 717 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 SMG5Q9UPR3 1016 aaKnown RBP13.08□□□□□ -0.32
PTBP1-216ENST00000590887 CUL9Q8IWT3 2517 aa13.08□□□□□ -0.32
PTBP1-216ENST00000590887 SLC7A4O43246 635 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 PGLSO95336 258 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 MT-CO1P00395 513 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 ATXN1LP0C7T5 689 aaKnown RBP13.07□□□□□ -0.32
PTBP1-216ENST00000590887 ARSAP15289 507 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 LPOP22079 712 aaPredicted RBP13.07□□□□□ -0.32
PTBP1-216ENST00000590887 HPDP32754 393 aaPredicted RBP13.07□□□□□ -0.32
PTBP1-216ENST00000590887 PPARGP37231 505 aaPredicted RBP13.07□□□□□ -0.32
PTBP1-216ENST00000590887 SLC18A1P54219 525 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms