RNA–Protein interactions for RNA: ENST00000590085.1

HMGN1P31-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 31, humanhuman

BASIC

Gene HMGN1P31, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P31-201ENST00000590085 CEP41Q9BYV8 373 aa9.43□□□□□ -0.9
HMGN1P31-201ENST00000590085 SUV39H2Q9H5I1 410 aa9.43□□□□□ -0.9
HMGN1P31-201ENST00000590085 SCUBE2Q9NQ36 999 aa9.43□□□□□ -0.9
HMGN1P31-201ENST00000590085 HAUS2Q9NVX0 235 aa9.43□□□□□ -0.9
HMGN1P31-201ENST00000590085 METRNQ9UJH8 293 aa9.43□□□□□ -0.9
HMGN1P31-201ENST00000590085 GMEB2Q9UKD1 530 aa9.43□□□□□ -0.9
HMGN1P31-201ENST00000590085 PILRBQ9UKJ0 227 aa9.43□□□□□ -0.9
HMGN1P31-201ENST00000590085 FADS3Q9Y5Q0 445 aa9.43□□□□□ -0.9
HMGN1P31-201ENST00000590085 CNOT1A5YKK6 2376 aaKnown RBP9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 ATXN2Q99700 1313 aaKnown RBP9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 MEI4A8MW99 385 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 ENC1O14682 589 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 FZD6O60353 706 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 GFRA3O60609 400 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 LRP3O75074 770 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 ATP1A1P05023 1023 aaKnown RBP9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 RBP3P10745 1247 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 TIMP2P16035 220 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 TGM1P22735 817 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 CES1P23141 567 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 RBL1P28749 1068 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 CD68P34810 354 aaPredicted RBP9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 MMP12P39900 470 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 MPLP40238 635 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 SUOXP51687 545 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 EIF3EP60228 445 aaKnown RBP9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 SKOR1P84550 965 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 CREB5Q02930 508 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 SIX1Q15475 284 aaPredicted RBP9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 SLC14A2Q15849 920 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 TEX44Q53QW1 395 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 NEK5Q6P3R8 708 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 FBXL19Q6PCT2 694 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 SYT12Q8IV01 421 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 CDKL3Q8IVW4 592 aaPredicted RBP9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 ZNF567Q8N184 647 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 C1orf216Q8TAB5 229 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 HTR3CQ8WXA8 447 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 RUBCNQ92622 972 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 TADA1Q96BN2 335 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 FAM122AQ96E09 287 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 IMP4Q96G21 291 aaKnown RBP9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 TEKT5Q96M29 485 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 AGAP3Q96P47 875 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 TDRD1Q9BXT4 1180 aaKnown RBP9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 ARRDC1-AS1Q9H2J1 176 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 EBF2Q9HAK2 575 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 PARD6AQ9NPB6 346 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 TMEM74BQ9NUR3 256 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 SEPT10Q9P0V9 454 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 NCDNQ9UBB6 729 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 GGT7Q9UJ14 662 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 TPX2Q9ULW0 747 aaKnown RBP9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 ZFR2Q9UPR6 939 aaKnown RBP9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 ITM2BQ9Y287 266 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 TTLL3Q9Y4R7 772 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 SLCO1B1Q9Y6L6 691 aa9.42□□□□□ -0.9
HMGN1P31-201ENST00000590085 CACNA1AO00555 2505 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 FAM47DPA6NHR8 397 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 H7C0C1 242 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 FANCGO15287 622 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 TSPAN6O43657 245 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 RNGTTO60942 597 aaKnown RBP9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 ZNF189O75820 626 aaPredicted RBP9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 NEBLO76041 1014 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 FSBPO95073 299 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 PGLSO95336 258 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 CPP00450 1065 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 SERPINF2P08697 491 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 NFKB1P19838 968 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 MSNP26038 577 aaKnown RBP9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 CD27P26842 260 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 CXCR5P32302 372 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 CD86P42081 329 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 DPP6P42658 865 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 ATP5OP48047 213 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 ITKQ08881 620 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 OASLQ15646 514 aaKnown RBP9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 UGP2Q16851 508 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 ZNF284Q2VY69 593 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 WDR45BQ5MNZ6 344 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 SYCP2LQ5T4T6 812 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 CFAP58Q5T655 872 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 KIAA1161Q6NSJ0 714 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 PRPF39Q86UA1 669 aaKnown RBP9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 ZSCAN30Q86W11 494 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 HORMAD1Q86X24 394 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 C17orf53Q8N3J3 647 aaPredicted RBP9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 ATG4AQ8WYN0 398 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 MCCC1Q96RQ3 725 aaPredicted RBP9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 TRIB3Q96RU7 358 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 WDR24Q96S15 920 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 VAT1Q99536 393 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 FRMD8P1Q9BZ68 369 aaPredicted RBP9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 SLC25A51Q9H1U9 297 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 C10orf88Q9H8K7 445 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 USP29Q9HBJ7 922 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 GLOD4Q9HC38 313 aa9.41□□□□□ -0.9
HMGN1P31-201ENST00000590085 PCDH12Q9NPG4 1184 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms