RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 DKK3Q9UBP4 350 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 LHX6Q9UPM6 363 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 ADAMTS20P59510 1910 aa17.01■□□□□ 0.31
CROCCP3-203ENST00000589964 IGSF10Q6WRI0 2623 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 A0A1W2PNU3 283 aaPredicted RBP17■□□□□ 0.31
CROCCP3-203ENST00000589964 PRPSAP2O60256 369 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 MAGEC1O60732 1142 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 C6P13671 934 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 AIF1P55008 147 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 SLC25A11Q02978 314 aaKnown RBP17■□□□□ 0.31
CROCCP3-203ENST00000589964 SLC10A7Q0GE19 358 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 SGCGQ13326 291 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 IHHQ14623 411 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 ATP13A4Q4VNC1 1196 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 FIGNQ5HY92 759 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 GUSBP11Q6P575 273 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 CRTC1Q6UUV9 634 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 TMPRSS12Q86WS5 348 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 SFTPA2Q8IWL1 248 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 PLA2G15Q8NCC3 412 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 FNIP1Q8TF40 1166 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 RAB7BQ96AH8 199 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 LRRC61Q9BV99 259 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 PACSIN1Q9BY11 444 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 STAU2Q9NUL3 570 aaKnown RBP eCLIP17■□□□□ 0.31
CROCCP3-203ENST00000589964 ANKRD36A6QL64 1941 aa17■□□□□ 0.31
CROCCP3-203ENST00000589964 BPTFQ12830 3046 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 A8MX80 341 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 FPGTO14772 594 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 RARAP10276 462 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 JUPP14923 745 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 JUNDP17535 347 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 MMP12P39900 470 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 UBASH3AP57075 661 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 CCDC15Q0P6D6 951 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 ZSCAN23Q3MJ62 389 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 TMEM52BQ4KMG9 183 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 POLNQ7Z5Q5 900 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 SRLQ86TD4 932 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 PARGQ86W56 976 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 LMX1AQ8TE12 382 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 CSPG4P5Q96PW8 444 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 NCAPGQ9BPX3 1015 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 CPEB1Q9BZB8 566 aaKnown RBP16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 SUV39H2Q9H5I1 410 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 PCDH18Q9HCL0 1135 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 IPO11Q9UI26 975 aaKnown RBP16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 OR1A2Q9Y585 309 aa16.99■□□□□ 0.31
CROCCP3-203ENST00000589964 RP1P56715 2156 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 LRP4O75096 1905 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 A0A1W2PQJ5 194 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 RIOK3O14730 519 aaKnown RBP16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 PALMO75781 387 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 MAP3K6O95382 1288 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 CKMT1AP12532 417 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 IL4RP24394 825 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 RABIFP47224 123 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 LIG3P49916 1009 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 DPYSL2Q16555 572 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 CDKN3Q16667 212 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 UGP2Q16851 508 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 ALG11Q2TAA5 492 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 PERM1Q5SV97 790 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 PHACTR4Q8IZ21 702 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 PDCD7Q8N8D1 485 aaKnown RBP16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 CXorf40AQ8TE69 158 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 CASKIN2Q8WXE0 1202 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 ASB12Q8WXK4 309 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 TSACCQ96A04 125 aaPredicted RBP16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 NUP85Q9BW27 656 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 EDEM3Q9BZQ6 932 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 XPO4Q9C0E2 1151 aaKnown RBP16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 NLGN3Q9NZ94 848 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 CAPN11Q9UMQ6 739 aa16.98■□□□□ 0.31
CROCCP3-203ENST00000589964 ARHGAP42A6NI28 874 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 TRAFD1O14545 582 aaPredicted RBP16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 DAPK3O43293 454 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 OPA1O60313 960 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 TM7SF2O76062 418 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 RNF8O76064 485 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 PCCBP05166 539 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 CYP1A2P05177 515 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 ITPKBP27987 946 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 HTR7P34969 479 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 EIF4A3P38919 411 aaKnown RBP16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 TAS2R40P59535 323 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 MAXP61244 160 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 DAB2P98082 770 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 SLC35F3Q8IY50 421 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 DCBLD1Q8N8Z6 715 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 DENND6BQ8NEG7 585 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 RFFLQ8WZ73 363 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 ECHDC3Q96DC8 303 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 SP110Q9HB58 689 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 DKK4Q9UBT3 224 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 ANAPC7Q9UJX3 599 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 ATP8A1Q9Y2Q0 1164 aa16.97■□□□□ 0.31
CROCCP3-203ENST00000589964 AQP9O43315 295 aa16.96■□□□□ 0.31
CROCCP3-203ENST00000589964 MT-CO3P00414 261 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms