RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 CSO75390 466 aaKnown RBP8.08□□□□□ -1.12
SMAD4-209ENST00000589941 FSBPO95073 299 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 OAS1P00973 400 aaKnown RBP8.08□□□□□ -1.12
SMAD4-209ENST00000589941 ASLP04424 464 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 TPM1P09493 284 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 CDK4P11802 303 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 GCFC2P16383 781 aaKnown RBP8.08□□□□□ -1.12
SMAD4-209ENST00000589941 BMP7P18075 431 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 CYP3A5P20815 502 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 ABCB4P21439 1286 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 PRKCHP24723 683 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 LSSP48449 732 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 PEX3P56589 373 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 AKAP17AQ02040 695 aaKnown RBP8.08□□□□□ -1.12
SMAD4-209ENST00000589941 MYL5Q02045 173 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 PDIA5Q14554 519 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 FIGNQ5HY92 759 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 PRR31Q5SQ13 230 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 SPATA1Q5VX52 437 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 JADE1Q6IE81 842 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 PIK3AP1Q6ZUJ8 805 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 CATSPER3Q86XQ3 398 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 SCN4BQ8IWT1 228 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 ELF4Q99607 663 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-209ENST00000589941 POLR1BQ9H9Y6 1135 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 SPHK2Q9NRA0 654 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 THSD1Q9NS62 852 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 SAMD15Q9P1V8 674 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 LRWD1Q9UFC0 647 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 RP1P56715 2156 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 SDK2Q58EX2 2172 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 MED13LQ71F56 2210 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 ARHGEF35A5YM69 484 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 CCDC169A6NNP5 214 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 EFCAB8A8MWE9 144 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 NEDD8-MDP1E9PL57 170 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 PIRO00625 290 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 SLC9A3R1O14745 358 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-209ENST00000589941 CASC3O15234 703 aaKnown RBP8.07□□□□□ -1.12
SMAD4-209ENST00000589941 RTN2O75298 545 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 CDKL5O76039 1030 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 C4BPAP04003 597 aaKnown RBP8.07□□□□□ -1.12
SMAD4-209ENST00000589941 IGHV4-34P06331 123 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 ZNF18P17022 549 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 IFNAR1P17181 557 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 CKMT2P17540 419 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 ACP1P24666 158 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 ELAVL4P26378 380 aaKnown RBP8.07□□□□□ -1.12
SMAD4-209ENST00000589941 UQCRFS1P47985 274 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 MECP2P51608 486 aaKnown RBP8.07□□□□□ -1.12
SMAD4-209ENST00000589941 SLURP1P55000 103 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 CEBPZQ03701 1054 aaKnown RBP8.07□□□□□ -1.12
SMAD4-209ENST00000589941 MAPK7Q13164 816 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 ILKQ13418 452 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 CD276Q5ZPR3 534 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 SDE2Q6IQ49 451 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 SHC4Q6S5L8 630 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 TMPRSS6Q8IU80 811 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 TICAM1Q8IUC6 712 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 DCP1BQ8IZD4 617 aaKnown RBP8.07□□□□□ -1.12
SMAD4-209ENST00000589941 SYT8Q8NBV8 401 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 SPATA20Q8TB22 786 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 HTR3CQ8WXA8 447 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 SIPA1Q96FS4 1042 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 PRR11Q96HE9 360 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-209ENST00000589941 IFT74Q96LB3 600 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 MMS19Q96T76 1030 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 RPF1Q9H9Y2 349 aaKnown RBP8.07□□□□□ -1.12
SMAD4-209ENST00000589941 EBF2Q9HAK2 575 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 INTS13Q9NVM9 706 aa8.07□□□□□ -1.12
SMAD4-209ENST00000589941 CCDC196A0A1B0GTZ2 297 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 ZNF840PA6NDX5 716 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 CDRT15L2A8MXV6 281 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 TRIM38O00635 465 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 SCDO00767 359 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 SLC16A4O15374 487 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 CACNG3O60359 315 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 TSPAN3O60637 253 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 SDC3O75056 442 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 PPFIA2O75334 1257 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 PNMA6AP0CW24 399 aaPredicted RBP8.06□□□□□ -1.12
SMAD4-209ENST00000589941 IRF1P10914 325 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 MBL2P11226 248 aaPredicted RBP8.06□□□□□ -1.12
SMAD4-209ENST00000589941 WT1P19544 449 aaPredicted RBP8.06□□□□□ -1.12
SMAD4-209ENST00000589941 CD27P26842 260 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 OXTRP30559 389 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 DCTP40126 519 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 SYKP43405 635 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 CYP4F2P78329 520 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 GUCY1B3Q02153 619 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 TGIF1Q15583 401 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 TBR1Q16650 682 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 KRTAP21-3Q3LHN1 58 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 VASNQ6EMK4 673 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 SYT10Q6XYQ8 523 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 RSRC2Q7L4I2 434 aaKnown RBP8.06□□□□□ -1.12
SMAD4-209ENST00000589941 KIAA0907Q7Z7F0 614 aaPredicted RBP8.06□□□□□ -1.12
SMAD4-209ENST00000589941 SRRM1Q8IYB3 904 aaKnown RBP8.06□□□□□ -1.12
SMAD4-209ENST00000589941 CARFQ8N187 725 aa8.06□□□□□ -1.12
SMAD4-209ENST00000589941 ZNF564Q8TBZ8 553 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms