RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 RANBP9Q96S59 729 aa17.59■□□□□ 0.41
CXXC1-212ENST00000589940 ADGRE3Q9BY15 652 aa17.59■□□□□ 0.41
CXXC1-212ENST00000589940 CENPHQ9H3R5 247 aa17.59■□□□□ 0.41
CXXC1-212ENST00000589940 MRM3Q9HC36 420 aaKnown RBP17.59■□□□□ 0.41
CXXC1-212ENST00000589940 MOCS1Q9NZB8 636 aa17.59■□□□□ 0.41
CXXC1-212ENST00000589940 SLC8A2Q9UPR5 921 aa17.59■□□□□ 0.41
CXXC1-212ENST00000589940 TCAF1Q9Y4C2 921 aa17.59■□□□□ 0.41
CXXC1-212ENST00000589940 C1QAP02745 245 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 PDHA1P08559 390 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 MYLK3Q32MK0 819 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 KBTBD12Q3ZCT8 623 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 ANKRD20A4Q4UJ75 823 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 NAIF1Q69YI7 327 aaPredicted RBP17.58■□□□□ 0.4
CXXC1-212ENST00000589940 TRMT10BQ6PF06 316 aaKnown RBP17.58■□□□□ 0.4
CXXC1-212ENST00000589940 CES3Q6UWW8 571 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 PLPP6Q8IY26 295 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 FRS2Q8WU20 508 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 PPM1EQ8WY54 764 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 HLA-CQ95604 372 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 ARL8AQ96BM9 186 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 FCRL3Q96P31 734 aaPredicted RBP17.58■□□□□ 0.4
CXXC1-212ENST00000589940 ATP13A3Q9H7F0 1226 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 PRKAG3Q9UGI9 489 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 PLA2G4CQ9UP65 541 aa17.58■□□□□ 0.4
CXXC1-212ENST00000589940 HEATR9A2RTY3 570 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 GOLGA8KD6RF30 607 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 FZD6O60353 706 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 SOCS5O75159 536 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 CDH16O75309 829 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 BCL2L1Q07817 233 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 FRG1Q14331 258 aaKnown RBP17.57■□□□□ 0.4
CXXC1-212ENST00000589940 EFTUD2Q15029 972 aaKnown RBP eCLIP17.57■□□□□ 0.42e-7■■■■■ 44.2
CXXC1-212ENST00000589940 AAK1Q2M2I8 961 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 PREPLQ4J6C6 727 aaPredicted RBP17.57■□□□□ 0.4
CXXC1-212ENST00000589940 Q6ZVU0 165 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 CAMK1DQ8IU85 385 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.57■□□□□ 0.4
CXXC1-212ENST00000589940 PDCD6IPQ8WUM4 868 aaKnown RBP17.57■□□□□ 0.4
CXXC1-212ENST00000589940 RMDN1Q96DB5 314 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 MFSD3Q96ES6 412 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 PGM2Q96G03 612 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 SLC24A2Q9UI40 661 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 FAM169AQ9Y6X4 670 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 KIAA1549LQ6ZVL6 1849 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 ZCWPW2A0A1B0GU75 182 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 POC1B-GALNT4F8VUJ3 575 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 BNIP3LO60238 219 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 GCAP28676 217 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 CCNHP51946 323 aaPredicted RBP17.57■□□□□ 0.4
CXXC1-212ENST00000589940 ST8SIA6P61647 398 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 SEPT6Q14141 434 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 TTMPQ5BVD1 217 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 DPY19L3Q6ZPD9 716 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 TDRPQ86YL5 185 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 PLCD3Q8N3E9 789 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 DEFB123Q8N688 67 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 LPCAT1Q8NF37 534 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 ZNF778Q96MU6 729 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 TUBGCP5Q96RT8 1024 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 PHF7Q9BWX1 381 aaPredicted RBP17.57■□□□□ 0.4
CXXC1-212ENST00000589940 VPS18Q9P253 973 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 PCDHB9Q9Y5E1 797 aa17.57■□□□□ 0.4
CXXC1-212ENST00000589940 TBC1D3BA6NDS4 549 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 FAM159BA6NKW6 160 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 TTC34A8MYJ7 566 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 TRAFD1O14545 582 aaPredicted RBP17.56■□□□□ 0.4
CXXC1-212ENST00000589940 HTRA2O43464 458 aaPredicted RBP17.56■□□□□ 0.4
CXXC1-212ENST00000589940 PIGNO95427 931 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 POP4O95707 220 aaKnown RBP17.56■□□□□ 0.4
CXXC1-212ENST00000589940 NMBRP28336 390 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 SERPINA4P29622 427 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 GKP32189 559 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 RECQLP46063 649 aaPredicted RBP17.56■□□□□ 0.4
CXXC1-212ENST00000589940 RAD51Q06609 339 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 ARMC12Q5T9G4 340 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 ZNF449Q6P9G9 518 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 RIBC1Q8N443 379 aaPredicted RBP17.56■□□□□ 0.4
CXXC1-212ENST00000589940 KDM1BQ8NB78 822 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 OR2A12Q8NGT7 310 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 CSGALNACT1Q8TDX6 532 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 CPEB1Q9BZB8 566 aaKnown RBP17.56■□□□□ 0.4
CXXC1-212ENST00000589940 ANKRD66B4E2M5 251 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 RGS16O15492 202 aaPredicted RBP17.56■□□□□ 0.4
CXXC1-212ENST00000589940 RNF40O75150 1001 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 PIAS1O75925 651 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 KAT7O95251 611 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 PGLSO95336 258 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 GRIA2P42262 883 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 LAMB3Q13751 1172 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 GRM3Q14832 879 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 NLRP9Q7RTR0 991 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 UNC5BQ8IZJ1 945 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 KRT222Q8N1A0 295 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 BLOC1S5Q8TDH9 187 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 VOPP1Q96AW1 172 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 CERS2Q96G23 380 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 ATP6V1G3Q96LB4 118 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 PAFAH2Q99487 392 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 DHRS4Q9BTZ2 278 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 EURLQ9NYK6 297 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms