RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 CWC15Q9P013 229 aaKnown RBP12.8□□□□□ -0.36
RFX1-207ENST00000589937 BAHCC1Q9P281 2608 aa12.8□□□□□ -0.36
RFX1-207ENST00000589937 ZFC3H1O60293 1989 aaKnown RBP12.8□□□□□ -0.36
RFX1-207ENST00000589937 SCN8AQ9UQD0 1980 aa12.8□□□□□ -0.36
RFX1-207ENST00000589937 TSPAN11A1L157 253 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 PMS2P1A4D2B8 440 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 SMTNL1A8MU46 457 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 AQP9O43315 295 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 BRINP1O60477 761 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 CCDC172P0C7W6 258 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 C6P13671 934 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 HNRNPKP61978 463 aaKnown RBP eCLIP12.79□□□□□ -0.36
RFX1-207ENST00000589937 WSCD2Q2TBF2 565 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 INO80DQ53TQ3 878 aaPredicted RBP12.79□□□□□ -0.36
RFX1-207ENST00000589937 ERMARDQ5T6L9 678 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 HGSNATQ68CP4 663 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 PHACTR4Q8IZ21 702 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 DCBLD1Q8N8Z6 715 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 DENND6BQ8NEG7 585 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 CASKIN2Q8WXE0 1202 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 RFFLQ8WZ73 363 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 FUBP1Q96AE4 644 aaKnown RBP12.79□□□□□ -0.36
RFX1-207ENST00000589937 VCPIP1Q96JH7 1222 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 ZWILCHQ9H900 591 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 DKK3Q9UBP4 350 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 APOBEC3BQ9UH17 382 aaKnown RBP12.79□□□□□ -0.36
RFX1-207ENST00000589937 IPO11Q9UI26 975 aaKnown RBP12.79□□□□□ -0.36
RFX1-207ENST00000589937 CLCA2Q9UQC9 943 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 MGAQ8IWI9 3026 aa12.79□□□□□ -0.36
RFX1-207ENST00000589937 PRPSAP2O60256 369 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 OPA1O60313 960 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 TM7SF2O76062 418 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 MT-CO3P00414 261 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 SERPINC1P01008 464 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 PCCBP05166 539 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 PBX1P40424 430 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 NDST2P52849 883 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 FANCCQ00597 558 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 RAD51Q06609 339 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 RALGDSQ12967 914 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 ILKQ13418 452 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 NR1I3Q14994 352 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 FILIP1LQ4L180 1135 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 TDRD12Q587J7 1177 aaKnown RBP12.78□□□□□ -0.36
RFX1-207ENST00000589937 PRRT3Q5FWE3 981 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 PERM1Q5SV97 790 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 PELI3Q8N2H9 469 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 PLA2G15Q8NCC3 412 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 IFI44Q8TCB0 444 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 HSPH1Q92598 858 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 ARHGEF26Q96DR7 871 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 IFT43Q96FT9 208 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 BBC3Q96PG8 261 aaPredicted RBP12.78□□□□□ -0.36
RFX1-207ENST00000589937 CLPBQ9H078 707 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 SUV39H2Q9H5I1 410 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 SP110Q9HB58 689 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.78□□□□□ -0.36
RFX1-207ENST00000589937 OR1A2Q9Y585 309 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 AK5Q9Y6K8 562 aa12.78□□□□□ -0.36
RFX1-207ENST00000589937 ATMQ13315 3056 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 A0A1W2PNU3 283 aaPredicted RBP12.77□□□□□ -0.37
RFX1-207ENST00000589937 CPED1A4D0V7 1026 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 ARHGAP42A6NI28 874 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 A8MX80 341 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 H3BM21 787 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 DAPK3O43293 454 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 PALMO75781 387 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 MPOP05164 745 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 ALPPL2P10696 532 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 GZMAP12544 262 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 GM2AP17900 193 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 TGM2P21980 687 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 XPAP23025 273 aaPredicted RBP12.77□□□□□ -0.37
RFX1-207ENST00000589937 AMPD1P23109 780 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 HTR7P34969 479 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 EIF4A3P38919 411 aaKnown RBP12.77□□□□□ -0.37
RFX1-207ENST00000589937 LIG3P49916 1009 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 THOP1P52888 689 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 RTP5Q14D33 572 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 PTPRRQ15256 657 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 UGP2Q16851 508 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 ALG11Q2TAA5 492 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 TMEM52BQ4KMG9 183 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 HS1BP3Q53T59 392 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 CDCP2Q5VXM1 449 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 MACC1Q6ZN28 852 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 EFL1Q7Z2Z2 1120 aaKnown RBP12.77□□□□□ -0.37
RFX1-207ENST00000589937 SRLQ86TD4 932 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 DCP2Q8IU60 420 aaKnown RBP12.77□□□□□ -0.37
RFX1-207ENST00000589937 SLC35F3Q8IY50 421 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 PGBD5Q8N414 524 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 FNIP1Q8TF40 1166 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 ASB12Q8WXK4 309 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 TSACCQ96A04 125 aaPredicted RBP12.77□□□□□ -0.37
RFX1-207ENST00000589937 PDXPQ96GD0 296 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 CINPQ9BW66 212 aaPredicted RBP12.77□□□□□ -0.37
RFX1-207ENST00000589937 CPEB1Q9BZB8 566 aaKnown RBP12.77□□□□□ -0.37
RFX1-207ENST00000589937 THAP2Q9H0W7 228 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 ISCUQ9H1K1 167 aa12.77□□□□□ -0.37
RFX1-207ENST00000589937 ATP8A1Q9Y2Q0 1164 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms