RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	NPNT	Q6UXI9	565 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	ADAT2	Q7Z6V5	191 aa	Known RBP	17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	IQCH	Q86VS3	1027 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	LRRC49	Q8IUZ0	686 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	RHOT1	Q8IXI2	618 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	SLC22A18AS	Q8N1D0	253 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	KRT35	Q92764	455 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	FATE1	Q969F0	183 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	RNF25	Q96BH1	459 aa	Predicted RBP	17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	FEM1C	Q96JP0	617 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	BAG1	Q99933	345 aa	Predicted RBP	17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	NOD2	Q9HC29	1040 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	PCDH12	Q9NPG4	1184 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	BTBD3	Q9Y2F9	522 aa		17.47	■□□□□ 0.39
MBD1-221	ENST00000589867	POM121B	A6NF01	834 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	BTNL10	A8MVZ5	291 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	RIOK3	O14730	519 aa	Known RBP	17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	HTRA2	O43464	458 aa	Predicted RBP	17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	MMP20	O60882	483 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	KRT1	P04264	644 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	CEACAM1	P13688	526 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	TNNT1	P13805	278 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	CDKN2B	P42772	138 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	C21orf59	P57076	290 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	IL9R	Q01113	521 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	RALGDS	Q12967	914 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	GRM3	Q14832	879 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	TPRG1L	Q5T0D9	272 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	C11orf63	Q6NUN7	778 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	KANSL1	Q7Z3B3	1105 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	OR13H1	Q8NG92	308 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	BAHD1	Q8TBE0	780 aa	Predicted RBP	17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	ASB12	Q8WXK4	309 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	SPOCK2	Q92563	424 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	CENPT	Q96BT3	561 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	LENG8	Q96PV6	779 aa	Predicted RBP	17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	NUDCD1	Q96RS6	583 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	ELF4	Q99607	663 aa	Predicted RBP	17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	PCDHGB2	Q9Y5G2	931 aa		17.46	■□□□□ 0.39
MBD1-221	ENST00000589867	MATN3	O15232	486 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	PSTPIP1	O43586	416 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	ADRB1	P08588	477 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	GM2A	P17900	193 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	CCNC	P24863	283 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	HSPA9	P38646	679 aa	Known RBP	17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	MMP12	P39900	470 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	MMP13	P45452	471 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	RENBP	P51606	427 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	VAV2	P52735	878 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	AP1S1	P61966	158 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	TRAF2	Q12933	501 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	HNRNPD	Q14103	355 aa	Known RBP	17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	ZNF235	Q14590	738 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	STAT4	Q14765	748 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	IFI16	Q16666	785 aa	Known RBP	17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	MARC1	Q5VT66	337 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	ALG1L	Q6GMV1	187 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	BRAT1	Q6PJG6	821 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	NAXD	Q8IW45	347 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	LRRC57	Q8N9N7	239 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	HDAC11	Q96DB2	347 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	OLFM3	Q96PB7	478 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	LGMN	Q99538	433 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	HERPUD2	Q9BSE4	406 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	ATP13A3	Q9H7F0	1226 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	ERVMER34-1	Q9H9K5	563 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	NT5M	Q9NPB1	228 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	TRIM10	Q9UDY6	481 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	PCOLCE2	Q9UKZ9	415 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	PCDHGC4	Q9Y5F7	938 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	HS3ST3A1	Q9Y663	406 aa		17.45	■□□□□ 0.38
MBD1-221	ENST00000589867	SPAAR	A0A1B0GVQ0	90 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	SPOP	O43791	374 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	PCDHGA12	O60330	932 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	KRT10	P13645	584 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	SERPINA4	P29622	427 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	AKT2	P31751	481 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	RXRG	P48443	463 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	SUOX	P51687	545 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	BCL2L1	Q07817	233 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	PPID	Q08752	370 aa	Known RBP	17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	NIPAL4	Q0D2K0	466 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	OVGP1	Q12889	678 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	PTPRR	Q15256	657 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	LLGL1	Q15334	1064 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	ZFYVE27	Q5T4F4	411 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	CNTD1	Q8N815	330 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	TP53I13	Q8NBR0	393 aa	Predicted RBP	17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	ARRDC2	Q8TBH0	407 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	DESI2	Q9BSY9	194 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	WRAP53	Q9BUR4	548 aa	Known RBP	17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	GDF3	Q9NR23	364 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	MBNL1	Q9NR56	388 aa	Known RBP	17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	DDX56	Q9NY93	547 aa	Known RBP	17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	WASF3	Q9UPY6	502 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	ATP8A1	Q9Y2Q0	1164 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	COQ6	Q9Y2Z9	468 aa		17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	GOLGA4	Q13439	2230 aa	Known RBP	17.44	■□□□□ 0.38
MBD1-221	ENST00000589867	ACACB	O00763	2458 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	AKAP13	Q12802	2813 aa		17.43	■□□□□ 0.38

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