RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 BRAT1Q6PJG6 821 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 KDM7AQ6ZMT4 941 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 MACC1Q6ZN28 852 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 LRRC69Q6ZNQ3 347 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 LSMEM2Q8N112 164 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 NETO2Q8NC67 525 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 TPCN2Q8NHX9 752 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 LMX1AQ8TE12 382 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 GRAMD1AQ96CP6 724 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 TUBGCP5Q96RT8 1024 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 IL12RB2Q99665 862 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 BOCQ9BWV1 1114 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 SLC39A8Q9C0K1 460 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 ABCG4Q9H172 646 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 DHX35Q9H5Z1 703 aaKnown RBP12.34□□□□□ -0.43
VAT1-206ENST00000589709 HAUS4Q9H6D7 363 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 MBNL1Q9NR56 388 aaKnown RBP12.34□□□□□ -0.43
VAT1-206ENST00000589709 GPATCH2LQ9NWQ4 482 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 MYLKQ15746 1914 aa12.34□□□□□ -0.43
VAT1-206ENST00000589709 FASNP49327 2511 aaKnown RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 A0A1B0GTH6 734 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 TMCO5BA8MYB1 307 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 EEF2KO00418 725 aaKnown RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 BUB1BO60566 1050 aaPredicted RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 DXOO77932 396 aaKnown RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 MYF5P13349 255 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 MIPP30301 263 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 EIF4A3P38919 411 aaKnown RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 PAPOLAP51003 745 aaKnown RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 BLKP51451 505 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 NSUN2Q08J23 767 aaKnown RBP eCLIP12.33□□□□□ -0.44
VAT1-206ENST00000589709 RFTN1Q14699 578 aaPredicted RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 LRRC14Q15048 493 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 CA9Q16790 459 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 TBC1D25Q3MII6 688 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 LRRC73Q5JTD7 316 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 RFX8Q6ZV50 586 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 ZNF571Q7Z3V5 609 aaPredicted RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 SRLQ86TD4 932 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 PHACTR4Q8IZ21 702 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 SDR16C5Q8N3Y7 309 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 IFI44Q8TCB0 444 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 GLMNQ92990 594 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 CELF6Q96J87 481 aaKnown RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 EXOC2Q96KP1 924 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 PEBP4Q96S96 227 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 WRAP53Q9BUR4 548 aaKnown RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 SNRNP25Q9BV90 132 aaKnown RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 SLC13A1Q9BZW2 595 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 PCDH12Q9NPG4 1184 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 APOBEC3BQ9UH17 382 aaKnown RBP12.33□□□□□ -0.44
VAT1-206ENST00000589709 PCSK1NQ9UHG2 260 aa12.33□□□□□ -0.44
VAT1-206ENST00000589709 CELSR3Q9NYQ7 3312 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 DDX3XO00571 662 aaKnown RBP eCLIP12.32□□□□□ -0.44
VAT1-206ENST00000589709 DAPK3O43293 454 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 PRPSAP2O60256 369 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 CSO75390 466 aaKnown RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 GCATO75600 419 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 PALMO75781 387 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 PIGNO95427 931 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 MYBL1P10243 752 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 ERCC2P18074 760 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 ITPKBP27987 946 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 PCK1P35558 622 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 LSSP48449 732 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 RPIAP49247 311 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 ZNF165P49910 485 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 ADKP55263 362 aaKnown RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 PPARDQ03181 441 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 IL10RBQ08334 325 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 COL9A2Q14055 689 aaPredicted RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 NR1I3Q14994 352 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 ACAP1Q15027 740 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 IRF4Q15306 451 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 NR0B2Q15466 257 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 WSCD2Q2TBF2 565 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 DEFB133Q30KQ1 61 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 PRRT3Q5FWE3 981 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 FIGNQ5HY92 759 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 FAXCQ5TGI0 409 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 E4F1Q66K89 784 aaPredicted RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 ERAP2Q6P179 960 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 LVRNQ6Q4G3 990 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 CYP4V2Q6ZWL3 525 aaPredicted RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 EFL1Q7Z2Z2 1120 aaKnown RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 CAMK1DQ8IU85 385 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 ARHGAP12Q8IWW6 846 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 RBFAQ8N0V3 343 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 FSTL5Q8N475 847 aaPredicted RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 LZTR1Q8N653 840 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 TSEN2Q8NCE0 465 aaKnown RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 MAPK15Q8TD08 544 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 NAT6Q93015 286 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 ECHDC3Q96DC8 303 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 TRIM11Q96F44 468 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 ZNF578Q96N58 590 aaPredicted RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 NAP1L5Q96NT1 182 aaPredicted RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 KCTD15Q96SI1 283 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms