RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 NLGN3Q9NZ94 848 aa22.02■■□□□ 1.12
CIRBP-219ENST00000588411 SPEGQ15772 3267 aa22.02■■□□□ 1.11
CIRBP-219ENST00000588411 SRRM3A6NNA2 597 aaPredicted RBP22.01■■□□□ 1.11
CIRBP-219ENST00000588411 TRIM38O00635 465 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 CSF2P04141 144 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 TPM1P09493 284 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 JUPP14923 745 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 ACP1P24666 158 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 CASP14P31944 242 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 SSR1P43307 286 aaKnown RBP22.01■■□□□ 1.11
CIRBP-219ENST00000588411 PFN3P60673 137 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 YPEL5P62699 121 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 KRT81Q14533 505 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 HADHQ16836 314 aaKnown RBP22.01■■□□□ 1.11
CIRBP-219ENST00000588411 ZNF542PQ5EBM4 170 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 POLNQ7Z5Q5 900 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 PROSER1Q86XN7 944 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 BBS5Q8N3I7 341 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 PDCD7Q8N8D1 485 aaKnown RBP22.01■■□□□ 1.11
CIRBP-219ENST00000588411 NSMCE1Q8WV22 266 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 CSPG4P5Q96PW8 444 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 PCDH12Q9NPG4 1184 aa22.01■■□□□ 1.11
CIRBP-219ENST00000588411 AKAP13Q12802 2813 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 FAM149AA5PLN7 773 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 SCAMP1O15126 338 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 RARAP10276 462 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 HSPA9P38646 679 aaKnown RBP22■■□□□ 1.11
CIRBP-219ENST00000588411 AP1S1P61966 158 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 E2F1Q01094 437 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 BCL2L1Q07817 233 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 ZNF235Q14590 738 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 TSR1Q2NL82 804 aaKnown RBP22■■□□□ 1.11
CIRBP-219ENST00000588411 CAMK1DQ8IU85 385 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 BTN2A2Q8WVV5 523 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 USP29Q9HBJ7 922 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 ZNHIT6Q9NWK9 470 aaKnown RBP22■■□□□ 1.11
CIRBP-219ENST00000588411 LCMT1Q9UIC8 334 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 ATP8A1Q9Y2Q0 1164 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 CSNK1G3Q9Y6M4 447 aa22■■□□□ 1.11
CIRBP-219ENST00000588411 BUB1BO60566 1050 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-219ENST00000588411 TCF4P15884 667 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 JUNDP17535 347 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 AMPD1P23109 780 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 HNRNPH3P31942 346 aaKnown RBP21.99■■□□□ 1.11
CIRBP-219ENST00000588411 IGFALSP35858 605 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 DUSP3P51452 185 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-219ENST00000588411 POLR2LP62875 67 aaKnown RBP21.99■■□□□ 1.11
CIRBP-219ENST00000588411 LBRQ14739 615 aaKnown RBP21.99■■□□□ 1.11
CIRBP-219ENST00000588411 LRRC14Q15048 493 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 SPECC1LQ69YQ0 1117 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 ARHGAP36Q6ZRI8 547 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 ATPAF2Q8N5M1 289 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 ZNF548Q8NEK5 533 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-219ENST00000588411 ZNF564Q8TBZ8 553 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-219ENST00000588411 CTNNBL1Q8WYA6 563 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-219ENST00000588411 BTBD6Q96KE9 485 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 PSKH2Q96QS6 385 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 DEF6Q9H4E7 631 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 NCKIPSDQ9NZQ3 722 aa21.99■■□□□ 1.11
CIRBP-219ENST00000588411 RCOR3Q9P2K3 495 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-219ENST00000588411 PTPRBP23467 1997 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 ASPMQ8IZT6 3477 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.98■■□□□ 1.11
CIRBP-219ENST00000588411 TRABD2BA6NFA1 517 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 RIOK3O14730 519 aaKnown RBP21.98■■□□□ 1.11
CIRBP-219ENST00000588411 LZTS3O60299 673 aaPredicted RBP21.98■■□□□ 1.11
CIRBP-219ENST00000588411 ITIH2P19823 946 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 EIF4A3P38919 411 aaKnown RBP21.98■■□□□ 1.11
CIRBP-219ENST00000588411 RGRP47804 291 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 SCNN1BP51168 640 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 SLC25A11Q02978 314 aaKnown RBP21.98■■□□□ 1.11
CIRBP-219ENST00000588411 HES3Q5TGS1 186 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 OR8K1Q8NGG5 319 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 TSPY26PQ9H489 355 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 PCDH18Q9HCL0 1135 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 CTTNBP2NLQ9P2B4 639 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 UVRAGQ9P2Y5 699 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 SPASTQ9UBP0 616 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 DKK4Q9UBT3 224 aa21.98■■□□□ 1.11
CIRBP-219ENST00000588411 A0A1W2PQ67 120 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 CFAP69A5D8W1 941 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 TMEM110-MUSTN1A8MSY1 372 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 K7ESM1 405 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 AQP9O43315 295 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 CAPNS1P04632 268 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 H2AFZP0C0S5 128 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 CKMT1AP12532 417 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 C6P13671 934 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 NFKBIAP25963 317 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 MMP12P39900 470 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 CDH6P55285 790 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 IRF4Q15306 451 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 MACC1Q6ZN28 852 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 H2AFVQ71UI9 128 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 MARCH9Q86YJ5 346 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 LRRC49Q8IUZ0 686 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 FAM181AQ8N9Y4 354 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 TP53I13Q8NBR0 393 aaPredicted RBP21.97■■□□□ 1.11
CIRBP-219ENST00000588411 ATL2Q8NHH9 583 aa21.97■■□□□ 1.11
CIRBP-219ENST00000588411 MDM1Q8TC05 714 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms