RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 FAXCQ5TGI0 409 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 ZCCHC8Q6NZY4 707 aaKnown RBP14.48□□□□□ -0.09
VMP1-206ENST00000587945 CRTC1Q6UUV9 634 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 ARHGAP36Q6ZRI8 547 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 RFX8Q6ZV50 586 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 NYAP1Q6ZVC0 841 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 CYP4V2Q6ZWL3 525 aaPredicted RBP14.48□□□□□ -0.09
VMP1-206ENST00000587945 EFL1Q7Z2Z2 1120 aaKnown RBP14.48□□□□□ -0.09
VMP1-206ENST00000587945 ARHGAP12Q8IWW6 846 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 PHACTR4Q8IZ21 702 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 TSEN2Q8NCE0 465 aaKnown RBP14.48□□□□□ -0.09
VMP1-206ENST00000587945 MAPK15Q8TD08 544 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 BBC3Q96PG8 261 aaPredicted RBP14.48□□□□□ -0.09
VMP1-206ENST00000587945 IL12RB2Q99665 862 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 BPIFA3Q9BQP9 254 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 LRRC61Q9BV99 259 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 C1QTNF7Q9BXJ2 289 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 ABCG4Q9H172 646 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 AIPL1Q9NZN9 384 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 SPASTQ9UBP0 616 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 CNOT8Q9UFF9 292 aaKnown RBP14.48□□□□□ -0.09
VMP1-206ENST00000587945 APOBEC3BQ9UH17 382 aaKnown RBP14.48□□□□□ -0.09
VMP1-206ENST00000587945 RAI2Q9Y5P3 530 aa14.48□□□□□ -0.09
VMP1-206ENST00000587945 ADAMTS20P59510 1910 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 ATRXP46100 2492 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 TSPAN11A1L157 253 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 ARHGAP42A6NI28 874 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 DFFAO00273 331 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 CASC3O15234 703 aaKnown RBP14.47□□□□□ -0.09
VMP1-206ENST00000587945 PRPSAP2O60256 369 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 CSO75390 466 aaKnown RBP14.47□□□□□ -0.09
VMP1-206ENST00000587945 PALMO75781 387 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 GP1BAP07359 652 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 CELA2BP08218 269 aaPredicted RBP14.47□□□□□ -0.09
VMP1-206ENST00000587945 C6P13671 934 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 ERCC2P18074 760 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 TGM2P21980 687 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 YPEL5P62699 121 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 PPP6R3Q5H9R7 873 aaPredicted RBP14.47□□□□□ -0.09
VMP1-206ENST00000587945 CFAP58Q5T655 872 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 AFMIDQ63HM1 303 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 PPP1R2P3Q6NXS1 205 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 CAVIN1Q6NZI2 390 aaKnown RBP14.47□□□□□ -0.09
VMP1-206ENST00000587945 TP53INP2Q8IXH6 220 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 NPWQ8N729 165 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 SNIP1Q8TAD8 396 aaKnown RBP14.47□□□□□ -0.09
VMP1-206ENST00000587945 BTN2A2Q8WVV5 523 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 FGF11Q92914 225 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 TSACCQ96A04 125 aaPredicted RBP14.47□□□□□ -0.09
VMP1-206ENST00000587945 ZNF653Q96CK0 615 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 DEPDC7Q96QD5 511 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 CLPBQ9H078 707 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 USP29Q9HBJ7 922 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 EVA1BQ9NVM1 165 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 DONSONQ9NYP3 566 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 MYO1AQ9UBC5 1043 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 SALL4Q9UJQ4 1053 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 TRPM6Q9BX84 2022 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 LOC400499M0QZD8 3231 aa14.47□□□□□ -0.09
VMP1-206ENST00000587945 SMG1Q96Q15 3661 aaKnown RBP14.46□□□□□ -0.09
VMP1-206ENST00000587945 A0A1B0GTH6 734 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 RIOK3O14730 519 aaKnown RBP14.46□□□□□ -0.09
VMP1-206ENST00000587945 MUSKO15146 869 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 YY2O15391 372 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 RRP8O43159 456 aaKnown RBP14.46□□□□□ -0.09
VMP1-206ENST00000587945 USP12O75317 370 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 LRCH4O75427 683 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 RNF8O76064 485 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 TSHRP16473 764 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 PRKCIP41743 596 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 ZNF165P49910 485 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 LIG3P49916 1009 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 KLHL30Q0D2K2 578 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 ELP6Q0PNE2 266 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 CCDC173Q0VFZ6 552 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 LRRC14Q15048 493 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 NR0B2Q15466 257 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 TBC1D25Q3MII6 688 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 PERM1Q5SV97 790 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 MACC1Q6ZN28 852 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 LRRC69Q6ZNQ3 347 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 SRLQ86TD4 932 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 SLC35F3Q8IY50 421 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 HCAR2Q8TDS4 363 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 NSMCE3Q96MG7 304 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 ZNF641Q96N77 438 aaPredicted RBP14.46□□□□□ -0.09
VMP1-206ENST00000587945 SLC13A1Q9BZW2 595 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 SP110Q9HB58 689 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 CWC15Q9P013 229 aaKnown RBP14.46□□□□□ -0.09
VMP1-206ENST00000587945 OR1A2Q9Y585 309 aa14.46□□□□□ -0.09
VMP1-206ENST00000587945 A0A1W2PQC6 194 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 TTC24A2A3L6 582 aaPredicted RBP14.45□□□□□ -0.1
VMP1-206ENST00000587945 EME2A4GXA9 379 aaPredicted RBP14.45□□□□□ -0.1
VMP1-206ENST00000587945 LMO7DNF2Z398 122 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 TPP1O14773 563 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 LZTS3O60299 673 aaPredicted RBP14.45□□□□□ -0.1
VMP1-206ENST00000587945 PCCBP05166 539 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 ANXA6P08133 673 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 GZMAP12544 262 aa14.45□□□□□ -0.1
VMP1-206ENST00000587945 TCF4P15884 667 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms