RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 MDM1Q8TC05 714 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 MZB1Q8WU39 189 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 NXPE3Q969Y0 559 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 MFSD3Q96ES6 412 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 CERS2Q96G23 380 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 PKNOX2Q96KN3 472 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 FCRL3Q96P31 734 aaPredicted RBP10.28□□□□□ -0.76
APOC1-201ENST00000586638 FEM1AQ9BSK4 669 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 NAT9Q9BTE0 207 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 CAPS2Q9BXY5 557 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 TRABDQ9H4I3 376 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 SCUBE2Q9NQ36 999 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 VPS45Q9NRW7 570 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 TCAF1Q9Y4C2 921 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 MYO10Q9HD67 2058 aa10.28□□□□□ -0.76
APOC1-201ENST00000586638 SCN8AQ9UQD0 1980 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 ZCWPW2A0A1B0GU75 182 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 FAM237BA0A1B0GVD1 139 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 A0A1W2PPM1 405 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 KRBA1A5PL33 1030 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 TRIM49D1C9J1S8 452 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 K7ERQ8 282 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 AP3B1O00203 1094 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 INSIG1O15503 277 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 SPAG7O75391 227 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 USP1O94782 785 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 ALDH1A2O94788 518 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 PAPLNO95428 1278 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 POLBP06746 335 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 ERVK-10P10266 1014 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 CHN1P15882 459 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 CR2P20023 1033 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 VIPR2P41587 438 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 CTSOP43234 321 aaPredicted RBP10.27□□□□□ -0.77
APOC1-201ENST00000586638 RHOAP61586 193 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 MGAT5Q09328 741 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 GALNT3Q14435 633 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 RASA2Q15283 850 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 SLC1A5Q15758 541 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 PLEKHG6Q3KR16 790 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 PITRM1Q5JRX3 1037 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 PCID2Q5JVF3 399 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 SIRPB2Q5JXA9 342 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 LY6G5CQ5SRR4 150 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 MPP7Q5T2T1 576 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 ATXN7L2Q5T6C5 722 aaPredicted RBP10.27□□□□□ -0.77
APOC1-201ENST00000586638 RANBP10Q6VN20 620 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 KCNMB4Q86W47 210 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 SLC26A11Q86WA9 606 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 ANKRD42Q8N9B4 389 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 MGARPQ8TDB4 240 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 FEM1CQ96JP0 617 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 ZNF778Q96MU6 729 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 PSKH2Q96QS6 385 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 KLF6Q99612 283 aaPredicted RBP10.27□□□□□ -0.77
APOC1-201ENST00000586638 BBS2Q9BXC9 721 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 LINC00597Q9H2U6 94 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 NOD2Q9HC29 1040 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 PPANQ9NQ55 473 aaKnown RBP10.27□□□□□ -0.77
APOC1-201ENST00000586638 SPHK2Q9NRA0 654 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 CHRAC1Q9NRG0 131 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 ABCB8Q9NUT2 735 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 MOCS1Q9NZB8 636 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 SLC2A6Q9UGQ3 507 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 INTS6Q9UL03 887 aaKnown RBP10.27□□□□□ -0.77
APOC1-201ENST00000586638 CA14Q9ULX7 337 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 IKBKGQ9Y6K9 419 aa10.27□□□□□ -0.77
APOC1-201ENST00000586638 ZFHX4Q86UP3 3567 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 TMEM120BA0PK00 339 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 SOBPA7XYQ1 873 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 SHOX2O60902 331 aaPredicted RBP10.26□□□□□ -0.77
APOC1-201ENST00000586638 MT-CO1P00395 513 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 PENKP01210 267 aaPredicted RBP10.26□□□□□ -0.77
APOC1-201ENST00000586638 SERPINF2P08697 491 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 BRAFP15056 766 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 FSHRP23945 695 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 MDH1P40925 334 aaKnown RBP10.26□□□□□ -0.77
APOC1-201ENST00000586638 SERPINH1P50454 418 aaKnown RBP10.26□□□□□ -0.77
APOC1-201ENST00000586638 SCNN1BP51168 640 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 CDK18Q07002 472 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 TRAF2Q12933 501 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 NR1H3Q13133 447 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 TERF2Q15554 542 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 SLC14A2Q15849 920 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 TRIM68Q6AZZ1 485 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 PKN3Q6P5Z2 889 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 PACS1Q6VY07 963 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 TMEM135Q86UB9 458 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 LRRC6Q86X45 466 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 CELF5Q8N6W0 485 aaKnown RBP10.26□□□□□ -0.77
APOC1-201ENST00000586638 FIBINQ8TAL6 211 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 IFT43Q96FT9 208 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 LMLNQ96KR4 655 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 LRRC3BQ96PB8 259 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 NUDCD1Q96RS6 583 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 C2orf49Q9BVC5 232 aaPredicted RBP10.26□□□□□ -0.77
APOC1-201ENST00000586638 KIFC1Q9BW19 673 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 TDRD1Q9BXT4 1180 aaKnown RBP10.26□□□□□ -0.77
APOC1-201ENST00000586638 TM6SF2Q9BZW4 377 aa10.26□□□□□ -0.77
APOC1-201ENST00000586638 CNOT10Q9H9A5 744 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms