RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 GABRG3Q99928 467 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 GLOD4Q9HC38 313 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 SEPT10Q9P0V9 454 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 STON1Q9Y6Q2 735 aa12.79□□□□□ -0.36
VMP1-202ENST00000585847 A0A087WUV0 522 aaPredicted RBP12.78□□□□□ -0.36
VMP1-202ENST00000585847 TTC34A8MYJ7 566 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 GOLGA8KD6RF30 607 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 RIPK2O43353 540 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 TMEM63AO94886 807 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 KLF8O95600 359 aaPredicted RBP12.78□□□□□ -0.36
VMP1-202ENST00000585847 JCHAINP01591 159 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 ATP5BP06576 529 aaKnown RBP12.78□□□□□ -0.36
VMP1-202ENST00000585847 FAM153BP0C7A2 387 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 NTSR1P30989 418 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 STX2P32856 288 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 MAGEA4P43358 317 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 CDH17Q12864 832 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 ZBTB17Q13105 803 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 MTAPQ13126 283 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 NAB1Q13506 487 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 LBRQ14739 615 aaKnown RBP12.78□□□□□ -0.36
VMP1-202ENST00000585847 TRADDQ15628 312 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 KLHL38Q2WGJ6 581 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 FAM153CQ494X1 144 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 KIAA1211LQ6NV74 962 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 CCDC25Q86WR0 208 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 KDM1BQ8NB78 822 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 GABPB2Q8TAK5 448 aaPredicted RBP12.78□□□□□ -0.36
VMP1-202ENST00000585847 PYROXD1Q8WU10 500 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 UCMAQ8WVF2 138 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 UBLCP1Q8WVY7 318 aaPredicted RBP12.78□□□□□ -0.36
VMP1-202ENST00000585847 PTPRN2Q92932 1015 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 NSMCE3Q96MG7 304 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 HINFPQ9BQA5 517 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 IL22Q9GZX6 179 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 CDC42EP4Q9H3Q1 356 aaKnown RBP12.78□□□□□ -0.36
VMP1-202ENST00000585847 SEMA4AQ9H3S1 761 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 RBM22Q9NW64 420 aaKnown RBP eCLIP12.78□□□□□ -0.36
VMP1-202ENST00000585847 BFARQ9NZS9 450 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 LHX3Q9UBR4 397 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 UBA2Q9UBT2 640 aaPredicted RBP12.78□□□□□ -0.36
VMP1-202ENST00000585847 FAM153AQ9UHL3 310 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 MMP17Q9ULZ9 603 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 EML5Q05BV3 1969 aa12.78□□□□□ -0.36
VMP1-202ENST00000585847 SDR42E2A6NKP2 422 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 MUSKO15146 869 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 METTL18O95568 372 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 LMNAP02545 664 aaKnown RBP12.77□□□□□ -0.37
VMP1-202ENST00000585847 MYZAPP0CAP1 466 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 ETS1P14921 441 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 PSMB4P28070 264 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 NPY2RP49146 381 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 SERPINH1P50454 418 aaKnown RBP12.77□□□□□ -0.37
VMP1-202ENST00000585847 NSUN2Q08J23 767 aaKnown RBP eCLIP12.77□□□□□ -0.37
VMP1-202ENST00000585847 PDIA2Q13087 525 aaKnown RBP12.77□□□□□ -0.37
VMP1-202ENST00000585847 HSF5Q4G112 596 aaPredicted RBP12.77□□□□□ -0.37
VMP1-202ENST00000585847 KCTD11Q693B1 232 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 ZC3H14Q6PJT7 736 aaKnown RBP12.77□□□□□ -0.37
VMP1-202ENST00000585847 MAMSTRQ6ZN01 415 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 NLRP9Q7RTR0 991 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 ZNF354CQ86Y25 554 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 MAML2Q8IZL2 1156 aaPredicted RBP12.77□□□□□ -0.37
VMP1-202ENST00000585847 SPOCK2Q92563 424 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 PEX13Q92968 403 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 IMP4Q96G21 291 aaKnown RBP12.77□□□□□ -0.37
VMP1-202ENST00000585847 SRPK1Q96SB4 655 aaKnown RBP12.77□□□□□ -0.37
VMP1-202ENST00000585847 SH3GL2Q99962 352 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 MGME1Q9BQP7 344 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 CINPQ9BW66 212 aaPredicted RBP12.77□□□□□ -0.37
VMP1-202ENST00000585847 CEP44Q9C0F1 390 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 C10orf88Q9H8K7 445 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 ARNT2Q9HBZ2 717 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 SAYSD1Q9NPB0 183 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 FCF1Q9Y324 198 aaKnown RBP12.77□□□□□ -0.37
VMP1-202ENST00000585847 ANKRD36A6QL64 1941 aa12.77□□□□□ -0.37
VMP1-202ENST00000585847 GVINP1Q7Z2Y8 2422 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 A0A1W2PQ67 120 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 HMGB1P1B2RPK0 211 aaPredicted RBP12.76□□□□□ -0.37
VMP1-202ENST00000585847 NPC1O15118 1278 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 ZBTB24O43167 697 aaPredicted RBP12.76□□□□□ -0.37
VMP1-202ENST00000585847 TMCC1O94876 653 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 CPP00450 1065 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 SERPINF2P08697 491 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 C7P10643 843 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 TDGF1P13385 188 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 NFKB1P19838 968 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 MAGEA9P43362 315 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 RGRP47804 291 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 CSNK1DP48730 415 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 AP1S1P61966 158 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 SATB1Q01826 763 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 SLC10A7Q0GE19 358 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 GRM3Q14832 879 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 DLG2Q15700 870 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 HNRNPA1L2Q32P51 320 aaKnown RBP12.76□□□□□ -0.37
VMP1-202ENST00000585847 FNDC3BQ53EP0 1204 aaKnown RBP12.76□□□□□ -0.37
VMP1-202ENST00000585847 C9orf64Q5T6V5 341 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 C22orf39Q6P5X5 142 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 SYT13Q7L8C5 426 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms