RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 OXCT2Q9BYC2 517 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 COG4Q9H9E3 785 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 EURLQ9NYK6 297 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 RNF112Q9ULX5 631 aa12.55□□□□□ -0.4
SMARCA4-208ENST00000585799 RASSF9O75901 435 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 OAZ2O95190 189 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 CRTAMO95727 393 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 GLDCP23378 1020 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 CAP1Q01518 475 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 PTPRNQ16849 979 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 ATXN7L2Q5T6C5 722 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 LRRC8EQ6NSJ5 796 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 RINLQ6ZS11 566 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 DCBLD1Q8N8Z6 715 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 NT5C3BQ969T7 300 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 MRPL46Q9H2W6 279 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 PCDHB12Q9Y5F1 795 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 SBF1O95248 1867 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 BIRC5O15392 142 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 KRT36O76013 467 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 PAX3P23760 479 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 CRABP2P29373 138 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 SNX30Q5VWJ9 437 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 ARHGAP12Q8IWW6 846 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 RPL10LQ96L21 214 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 SAR1AQ9NR31 198 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 CATSPERZQ9NTU4 200 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 TRMT6Q9UJA5 497 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 FCF1Q9Y324 198 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 VWA7Q9Y334 891 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 MAP3K7O43318 606 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 DNAL1Q4LDG9 190 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 RBM15BQ8NDT2 890 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 ESAMQ96AP7 390 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 TMEM106CQ9BVX2 250 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 CRISPLD1Q9H336 500 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 CRLS1Q9UJA2 301 aa12.54□□□□□ -0.4
SMARCA4-208ENST00000585799 GUCA1CO95843 209 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 CDK7P50613 346 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 PKNOX1P55347 436 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 TSTD2Q5T7W7 516 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 PIM3Q86V86 326 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 ZC3HC1Q86WB0 502 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 HEXDCQ8WVB3 486 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 SMIM14Q96QK8 99 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 DHRS4Q9BTZ2 278 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 CPQQ9Y646 472 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 HNRNPCL1O60812 293 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 RPL14P50914 215 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 NIPAL4Q0D2K0 466 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 PRKAA1Q13131 559 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 DNAJB7Q7Z6W7 309 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 CIPCQ9C0C6 399 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 NDE1Q9NXR1 346 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 YIPF1Q9Y548 306 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 PLXNB2O15031 1838 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 CCDC160A6NGH7 325 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 TMEM233B4DJY2 109 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 CD3EAPO15446 510 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 SLC18A1P54219 525 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 AGKQ53H12 422 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 SIRPB2Q5JXA9 342 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 HECTD2Q5U5R9 776 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 TMEM198Q66K66 360 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 RSPO2Q6UXX9 243 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 TMPRSS6Q8IU80 811 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 LRRC49Q8IUZ0 686 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 HERC6Q8IVU3 1022 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 ZNF398Q8TD17 642 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 TUBGCP3Q96CW5 907 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 MRGPRX2Q96LB1 330 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 C7orf26Q96N11 449 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 TNKS2Q9H2K2 1166 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 EML4Q9HC35 981 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 TAS2R1Q9NYW7 299 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 SPG21Q9NZD8 308 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 OTOFQ9HC10 1997 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 CEP350Q5VT06 3117 aa12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 ATXN2Q99700 1313 aaKnown RBP12.53□□□□□ -0.4
SMARCA4-208ENST00000585799 ZCWPW2A0A1B0GU75 182 aa12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 C2orf78A6NCI8 922 aa12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 BTN3A1O00481 513 aa12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 CXCL14O95715 111 aa12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 AKT1P31749 480 aa12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 ETV4P43268 484 aa12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 PCLAFQ15004 111 aa12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 SUGP1Q8IWZ8 645 aaKnown RBP12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 PTGR2Q8N8N7 351 aaPredicted RBP12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 PAWRQ96IZ0 340 aaKnown RBP12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 TSEN34Q9BSV6 310 aaKnown RBP12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 CADM1Q9BY67 442 aaKnown RBP12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 SMG9Q9H0W8 520 aaKnown RBP12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 DENND2DQ9H6A0 471 aaPredicted RBP12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 CCDC167Q9P0B6 97 aa12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 CFAP97Q9P2B7 532 aa12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 PRKAG3Q9UGI9 489 aa12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 EVLQ9UI08 416 aaPredicted RBP12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 ANGPTL2Q9UKU9 493 aa12.52□□□□□ -0.4
SMARCA4-208ENST00000585799 GSC2O15499 205 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms