RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PIK3C3Q8NEB9 887 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 ADAM32Q8TC27 787 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 SLC47A1Q96FL8 570 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 PRMT6Q96LA8 375 aaPredicted RBP13.13□□□□□ -0.31
RNF43-208ENST00000584437 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 A0A088AWK7 358 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 KPNA5O15131 536 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 SPTLC1O15269 473 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 KPNA6O60684 536 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 LYPLA1O75608 230 aaPredicted RBP13.13□□□□□ -0.31
RNF43-208ENST00000584437 NTRK1P04629 796 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 ZNF12P17014 697 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 ZNF10P21506 573 aaPredicted RBP13.13□□□□□ -0.31
RNF43-208ENST00000584437 GMFBP60983 142 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 POLR2LP62875 67 aaKnown RBP13.13□□□□□ -0.31
RNF43-208ENST00000584437 BMT2Q1RMZ1 405 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 PAN2Q504Q3 1202 aaKnown RBP13.13□□□□□ -0.31
RNF43-208ENST00000584437 CRTC3Q6UUV7 619 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 REPS2Q8NFH8 660 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 ELMO3Q96BJ8 720 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 ULBP1Q9BZM6 244 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 AKAP7Q9P0M2 348 aaPredicted RBP13.13□□□□□ -0.31
RNF43-208ENST00000584437 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 WWP2O00308 870 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 BANF1O75531 89 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 HNMTP50135 292 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 RHAGQ02094 409 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 ATP13A4Q4VNC1 1196 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 MTX3Q5HYI7 312 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 HYIQ5T013 277 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 BHLHB9Q6PI77 547 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 CYP20A1Q6UW02 462 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 FAM220AQ7Z4H9 259 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 TRNAU1APQ9NX07 287 aaKnown RBP13.13□□□□□ -0.31
RNF43-208ENST00000584437 IL1R1P14778 569 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 PLCL1Q15111 1095 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 FNBP1LQ5T0N5 605 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 THAP5Q7Z6K1 395 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 TMEM139Q8IV31 216 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 LGI2Q8N0V4 545 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 FITM2Q8N6M3 262 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 SMYD1Q8NB12 490 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 OR2T34Q8NGX1 318 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 OR2T3Q8NH03 318 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 HM13Q8TCT9 377 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 ALG3Q92685 438 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 LRRC4CQ9HCJ2 640 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 PSME2Q9UL46 239 aa13.13□□□□□ -0.31
RNF43-208ENST00000584437 CYP3A7-CYP3A51PA0A087WV96 503 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 TSPAN3O60637 253 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 SLC22A3O75751 556 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 UMPSP11172 480 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 COL6A2P12110 1019 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 CYP3A7P24462 503 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 RPL38P63173 70 aaKnown RBP13.12□□□□□ -0.31
RNF43-208ENST00000584437 ENPEPQ07075 957 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 SLC25A24Q6NUK1 477 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 GALNT18Q6P9A2 607 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 FAM183BPQ6ZVS7 135 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 SPATA19Q7Z5L4 167 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 HELQQ8TDG4 1101 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 FAR1Q8WVX9 515 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 ZBTB45Q96K62 511 aaPredicted RBP13.12□□□□□ -0.31
RNF43-208ENST00000584437 MECRQ9BV79 373 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 RHOBTB2Q9BYZ6 727 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 PORCNQ9H237 461 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 NOL11Q9H8H0 719 aaKnown RBP13.12□□□□□ -0.31
RNF43-208ENST00000584437 SAMD4AQ9UPU9 718 aaKnown RBP13.12□□□□□ -0.31
RNF43-208ENST00000584437 NWD1Q149M9 1564 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 ANKDD1BA6NHY2 528 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 A8MUI8 341 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 CHRNGP07510 517 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 CXCR2P25025 360 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 CCNHP51946 323 aaPredicted RBP13.12□□□□□ -0.31
RNF43-208ENST00000584437 RAB43Q86YS6 212 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 PGAM4Q8N0Y7 254 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 PWWP2AQ96N64 755 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 TEFMQ96QE5 360 aaKnown RBP13.12□□□□□ -0.31
RNF43-208ENST00000584437 S100A13Q99584 98 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 FBXO5Q9UKT4 447 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 VPS4AQ9UN37 437 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 POLR1DQ9Y2S0 133 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 DDTLA6NHG4 134 aaPredicted RBP13.12□□□□□ -0.31
RNF43-208ENST00000584437 URODP06132 367 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 ADRB2P07550 413 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 GRIK4Q16099 956 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 CCDC157Q569K6 752 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 POTEHQ6S545 545 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 TNS4Q8IZW8 715 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 GLIS3Q8NEA6 775 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 NKX2-3Q8TAU0 364 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 OMDQ99983 421 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 PDCD10Q9BUL8 212 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 SLC9A8Q9Y2E8 581 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 NFASCO94856 1347 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 CCNB1P14635 433 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 SKP1P63208 163 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 MED22Q15528 200 aa13.12□□□□□ -0.31
RNF43-208ENST00000584437 SMIM5Q71RC9 77 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms