RNA–Protein interactions for RNA: ENST00000584130.1

RIOK3-209, Transcript of RIO kinase 3, human

TSL 4

Gene RIOK3, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIOK3-209	ENST00000584130	LIAS	O43766	372 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	TMEM63A	O94886	807 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	CBSL	P0DN79	551 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	ITGAX	P20702	1163 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	ARRB2	P32121	409 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	CBS	P35520	551 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	CPOX	P36551	454 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	ABAT	P80404	500 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	NEXN	Q0ZGT2	675 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	DCTN2	Q13561	401 aa	Known RBP	4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	SIM2	Q14190	667 aa	Predicted RBP	4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	TBCE	Q15813	527 aa	Predicted RBP	4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	MON1B	Q7L1V2	547 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	SLC46A3	Q7Z3Q1	461 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	PATL1	Q86TB9	770 aa	Known RBP	4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	TDRP	Q86YL5	185 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	MB21D2	Q8IYB1	491 aa	Predicted RBP	4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	CADM4	Q8NFZ8	388 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	UCMA	Q8WVF2	138 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	OIT3	Q8WWZ8	545 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	SKA1	Q96BD8	255 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	PABPC5	Q96DU9	382 aa	Known RBP	4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	SAAL1	Q96ER3	474 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	PERP	Q96FX8	193 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	PIP5K1A	Q99755	562 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	RBM38	Q9H0Z9	239 aa	Known RBP	4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	PLEKHA4	Q9H4M7	779 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	EBF3	Q9H4W6	596 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	BRF2	Q9HAW0	419 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	CLK4	Q9HAZ1	481 aa	Known RBP	4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	CARD8	Q9Y2G2	431 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	LSM4	Q9Y4Z0	139 aa	Known RBP	4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	SCIN	Q9Y6U3	715 aa		4.81	□□□□□ -1.64
RIOK3-209	ENST00000584130	RGS11	O94810	467 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	SOX30	O94993	753 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	TF	P02787	698 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	SNHG28	P0DPA3	235 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	PCNA	P12004	261 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	SHMT1	P34896	483 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	CTCF	P49711	727 aa	Predicted RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	ENTPD1	P49961	510 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	GNAQ	P50148	359 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	HDAC4	P56524	1084 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	ADORA2A-AS1	P86434	159 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	CTTN	Q14247	550 aa	Known RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	ARHGEF6	Q15052	776 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	PPP2R5B	Q15173	497 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	SGO1	Q5FBB7	561 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	FNBP1L	Q5T0N5	605 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	OTUD1	Q5VV17	481 aa	Predicted RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	FAAH2	Q6GMR7	532 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	ZNF549	Q6P9A3	640 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	CPLX2	Q6PUV4	134 aa	Known RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	C1orf122	Q6ZSJ8	110 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	RSRC2	Q7L4I2	434 aa	Known RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	PARP16	Q8N5Y8	322 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	PRR26	Q8N8Z3	221 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	PPHLN1	Q8NEY8	458 aa	Known RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	HDAC2	Q92769	488 aa	Known RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	BBS4	Q96RK4	519 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	SIN3A	Q96ST3	1273 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	MXRA8	Q9BRK3	442 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	TKTL2	Q9H0I9	626 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	DDX4	Q9NQI0	724 aa	Known RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	OLA1	Q9NTK5	396 aa	Known RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	INTS6	Q9UL03	887 aa	Known RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	FAM96B	Q9Y3D0	163 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	SRPRB	Q9Y5M8	271 aa	Known RBP	4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	CAPN7	Q9Y6W3	813 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	PIAS3	Q9Y6X2	628 aa		4.8	□□□□□ -1.64
RIOK3-209	ENST00000584130	KDM4E	B2RXH2	506 aa	Predicted RBP	4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130		J3KR12	359 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	SEC14L5	O43304	696 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	MT-CYB	P00156	380 aa	Predicted RBP	4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	CLEC3B	P05452	202 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	AGA	P20933	346 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	MYF6	P23409	242 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	HOXA11	P31270	313 aa	Predicted RBP	4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	MAN1A1	P33908	653 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	ARL1	P40616	181 aa	Predicted RBP	4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	EIF3B	P55884	814 aa	Known RBP	4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	ROR2	Q01974	943 aa	Known RBP	4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	KRT32	Q14532	448 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	GSTA3	Q16772	222 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	ALG11	Q2TAA5	492 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	GPATCH4	Q5T3I0	446 aa	Known RBP	4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	DAB2IP	Q5VWQ8	1189 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	HIST2H2BC	Q6DN03	193 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	HIST2H2BD	Q6DRA6	164 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	CDC73	Q6P1J9	531 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	DSTYK	Q6XUX3	929 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	PALB2	Q86YC2	1186 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	MIGA1	Q8NAN2	632 aa		4.79	□□□□□ -1.64
RIOK3-209	ENST00000584130	ARRDC2	Q8TBH0	407 aa		4.79	□□□□□ -1.64

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