RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 GGT6Q6P531 493 aa4.31□□□□□ -1.72
SMCHD1-208ENST00000583344 PALB2Q86YC2 1186 aa4.31□□□□□ -1.72
SMCHD1-208ENST00000583344 TSPYL6Q8N831 410 aa4.31□□□□□ -1.72
SMCHD1-208ENST00000583344 MYRIPQ8NFW9 859 aa4.31□□□□□ -1.72
SMCHD1-208ENST00000583344 INPP4AQ96PE3 977 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-208ENST00000583344 NPAS1Q99742 590 aa4.31□□□□□ -1.72
SMCHD1-208ENST00000583344 CDK19Q9BWU1 502 aa4.31□□□□□ -1.72
SMCHD1-208ENST00000583344 PDE11AQ9HCR9 933 aa4.31□□□□□ -1.72
SMCHD1-208ENST00000583344 LIN7CQ9NUP9 197 aaKnown RBP4.31□□□□□ -1.72
SMCHD1-208ENST00000583344 IL36RNQ9UBH0 155 aa4.31□□□□□ -1.72
SMCHD1-208ENST00000583344 DOCK7Q96N67 2140 aa4.31□□□□□ -1.72
SMCHD1-208ENST00000583344 POGZQ7Z3K3 1410 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 YTHDC2Q9H6S0 1430 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 PTPRCP08575 1304 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 A0A0B4J293 547 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 ANO9A1A5B4 782 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 NPIPB13A6NJU9 1138 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 NPIPB5A8MRT5 1133 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 NPIPB4C9JG80 1138 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 HSPB6O14558 160 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 DYNC1I1O14576 645 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 BUB3O43684 328 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 REC8O95072 547 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 MBD3O95983 291 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 SNRNP70P08621 437 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 LYL1P12980 280 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 PRKCHP24723 683 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 HTR3AP46098 478 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 TRAPPC10P48553 1259 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 PPM1FP49593 454 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 OAZ1P54368 228 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 TUBA1BP68363 451 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 KIF19Q2TAC6 998 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 FAM83BQ5T0W9 1011 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 WBP2NLQ6ICG8 309 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 CASC1Q6TDU7 716 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 TRIM74Q86UV6 250 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 TRIM73Q86UV7 250 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 CPXCR1Q8N123 301 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 MUC20Q8N307 709 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 ANKRD42Q8N9B4 389 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 C2CD4CQ8TF44 421 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 KCNJ9Q92806 393 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 ZNF333Q96JL9 665 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 PRAM1Q96QH2 718 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 GFM1Q96RP9 751 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 PKP4Q99569 1192 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 TRIM31Q9BZY9 425 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 TMX4Q9H1E5 349 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 PHTF1Q9UMS5 762 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 RCE1Q9Y256 329 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 SRPRBQ9Y5M8 271 aaKnown RBP4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 DLC1Q96QB1 1528 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 ATP7BP35670 1465 aa4.3□□□□□ -1.72
SMCHD1-208ENST00000583344 SIGLEC1Q9BZZ2 1709 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 TMEM131LA2VDJ0 1609 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 IGLV5-52A0A0A0MRZ9 124 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 NTN3O00634 580 aaPredicted RBP4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 SOCS5O75159 536 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 LETM1O95202 739 aaPredicted RBP4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 MYZAPP0CAP1 466 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 FCGR2AP12318 317 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 GSTM2P28161 218 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 HILS1P60008 231 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 FOXD4Q12950 439 aaPredicted RBP4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 TMEM95Q3KNT9 176 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 GXYLT1Q4G148 440 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 RETSATQ6NUM9 610 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 C1orf228Q6PIY5 440 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 CLEC4GQ6UXB4 293 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 SMAP1Q8IYB5 467 aaPredicted RBP4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 SYTL1Q8IYJ3 562 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 NME8Q8N427 588 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 LILRB1Q8NHL6 650 aaPredicted RBP4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 GPT2Q8TD30 523 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 FAR1Q8WVX9 515 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 IGSF21Q96ID5 467 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 PKNOX2Q96KN3 472 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 TNIP3Q96KP6 325 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 NODALQ96S42 347 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 LHPPQ9H008 270 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 NEO1Q92859 1461 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 EDC4Q6P2E9 1401 aaKnown RBP4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 PREX1Q8TCU6 1659 aa4.29□□□□□ -1.72
SMCHD1-208ENST00000583344 RTL1A6NKG5 1358 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 ALKQ9UM73 1620 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 KIF20BQ96Q89 1820 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 SOS1Q07889 1333 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 LRRC7Q96NW7 1537 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 IGHV4-28A0A0C4DH34 117 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 DDTLA6NHG4 134 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 ITM2AO43736 263 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 HMMRO75330 724 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 DDAH2O95865 285 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 HLA-DQA2P01906 255 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 KRT10P13645 584 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 C21orf33P30042 268 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 PCP4P48539 62 aa4.28□□□□□ -1.72
SMCHD1-208ENST00000583344 CLCNKBP51801 687 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms