RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ALDH4A1	P30038	563 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	CHRNB4	P30926	498 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	CACNA2D1	P54289	1103 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	MFAP1	P55081	439 aa	Known RBP	5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	RPS21	P63220	83 aa	Known RBP	5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	CCDC15	Q0P6D6	951 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	NR5A1	Q13285	461 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	DAZAP2	Q15038	168 aa	Predicted RBP	5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	ACOX1	Q15067	660 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	PRKD1	Q15139	912 aa	Predicted RBP	5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	KYNU	Q16719	465 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	KYAT1	Q16773	422 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	TAS1R3	Q7RTX0	852 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	FGD2	Q7Z6J4	655 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	OSTM1	Q86WC4	334 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	PAQR7	Q86WK9	346 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	EID3	Q8N140	333 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	ZBTB2	Q8N680	514 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	NUP43	Q8NFH3	380 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	DNAJB14	Q8TBM8	379 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	PCED1B	Q96HM7	432 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	ZNF560	Q96MR9	790 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	CGRRF1	Q99675	332 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	HSD17B14	Q9BPX1	270 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	MTA3	Q9BTC8	594 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	IRX2	Q9BZI1	471 aa	Predicted RBP	5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	TMEM168	Q9H0V1	697 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	YAE1D1	Q9NRH1	226 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	AGO1	Q9UL18	857 aa	Known RBP	5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	CDH9	Q9ULB4	789 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	DDX19B	Q9UMR2	479 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	MTMR6	Q9Y217	621 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	FARSA	Q9Y285	508 aa	Known RBP	5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	C2CD2	Q9Y426	696 aa		5.01	□□□□□ -1.61
MSI2-216	ENST00000582772	STAB2	Q8WWQ8	2551 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772		A0A087X1B8	175 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	C1QTNF3-AMACR	E9PGA6	284 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	GADD45B	O75293	160 aa	Predicted RBP	5	□□□□□ -1.61
MSI2-216	ENST00000582772	RASGRP1	O95267	797 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	PAK4	O96013	591 aa	Predicted RBP	5	□□□□□ -1.61
MSI2-216	ENST00000582772	IGHE	P01854	428 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	CTSE	P14091	401 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	CD58	P19256	250 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	MX2	P20592	715 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	MPST	P25325	297 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	MST1	P26927	711 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	CD70	P32970	193 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	SOX5	P35711	763 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	SCNN1A	P37088	669 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	PNPLA4	P41247	253 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	PGF	P49763	221 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	DLX5	P56178	289 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	NUCB1	Q02818	461 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	DNM1	Q05193	864 aa	Known RBP	5	□□□□□ -1.61
MSI2-216	ENST00000582772	ATP1A4	Q13733	1029 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	CTTN	Q14247	550 aa	Known RBP	5	□□□□□ -1.61
MSI2-216	ENST00000582772	HIF1A	Q16665	826 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	KMT5B	Q4FZB7	885 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	5	□□□□□ -1.61
MSI2-216	ENST00000582772	MPP7	Q5T2T1	576 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	SPECC1L	Q69YQ0	1117 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	JADE1	Q6IE81	842 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	SYNE3	Q6ZMZ3	975 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	NYAP1	Q6ZVC0	841 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	LIMS2	Q7Z4I7	341 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	ADGRG6	Q86SQ4	1221 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	SPPL2C	Q8IUH8	684 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	SFTPA2	Q8IWL1	248 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	5	□□□□□ -1.61
MSI2-216	ENST00000582772	TOP6BL	Q8N6T0	577 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	CLEC1A	Q8NC01	280 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	MYCBPAP	Q8TBZ2	947 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	THAP3	Q8WTV1	239 aa	Predicted RBP	5	□□□□□ -1.61
MSI2-216	ENST00000582772	PIGT	Q969N2	578 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	MAGED4	Q96JG8	741 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	CCDC43	Q96MW1	224 aa	Known RBP	5	□□□□□ -1.61
MSI2-216	ENST00000582772	IP6K3	Q96PC2	410 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	SYT15	Q9BQS2	421 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	C1QTNF2	Q9BXJ5	285 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	ELOVL4	Q9GZR5	314 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	OCEL1	Q9H607	264 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	ESRP2	Q9H6T0	727 aa	Known RBP	5	□□□□□ -1.61
MSI2-216	ENST00000582772	TLR8	Q9NR97	1041 aa	Known RBP	5	□□□□□ -1.61
MSI2-216	ENST00000582772	GDAP2	Q9NXN4	497 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	ARHGAP28	Q9P2N2	729 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	STOML2	Q9UJZ1	356 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	CBLC	Q9ULV8	474 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	DGKB	Q9Y6T7	804 aa		5	□□□□□ -1.61
MSI2-216	ENST00000582772	CAD	P27708	2225 aa		4.99	□□□□□ -1.61
MSI2-216	ENST00000582772	YLPM1	P49750	1951 aa	Known RBP	4.99	□□□□□ -1.61
MSI2-216	ENST00000582772	RHPN2P1	A8MT19	583 aa		4.99	□□□□□ -1.61
MSI2-216	ENST00000582772	HCRT	O43612	131 aa		4.99	□□□□□ -1.61
MSI2-216	ENST00000582772	TDP2	O95551	362 aa		4.99	□□□□□ -1.61
MSI2-216	ENST00000582772	CRYAB	P02511	175 aa	Known RBP	4.99	□□□□□ -1.61
MSI2-216	ENST00000582772	RAB40AL	P0C0E4	278 aa		4.99	□□□□□ -1.61
MSI2-216	ENST00000582772	GNA11	P29992	359 aa		4.99	□□□□□ -1.61
MSI2-216	ENST00000582772	CORO1A	P31146	461 aa	Known RBP	4.99	□□□□□ -1.61
MSI2-216	ENST00000582772	CSK	P41240	450 aa		4.99	□□□□□ -1.61
MSI2-216	ENST00000582772	PEX5	P50542	639 aa		4.99	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms