RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TLR5O60602 858 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 NBNO60934 754 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 ANPEPP15144 967 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 SELPP16109 830 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 ACVRL1P37023 503 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 RAP1GDS1P52306 607 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 NDST2P52849 883 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 TRIP4Q15650 581 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-205ENST00000582730 ZNF789Q5FWF6 425 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 ARL13AQ5H913 290 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-205ENST00000582730 ZYG11AQ6WRX3 759 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 TMEM173Q86WV6 379 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-205ENST00000582730 LRRC49Q8IUZ0 686 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 MCMBPQ9BTE3 642 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 C1QTNF1Q9BXJ1 281 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 TMEM248Q9NWD8 314 aa13.79□□□□□ -0.2
SRSF1-205ENST00000582730 TMEM114B3SHH9 223 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 PEX11BO96011 259 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 PRAMEP78395 509 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 KIAA0930Q6ICG6 404 aaPredicted RBP13.78□□□□□ -0.2
SRSF1-205ENST00000582730 KDELC1Q6UW63 502 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 TMC7Q7Z402 723 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 CCDC124Q96CT7 223 aaKnown RBP13.78□□□□□ -0.2
SRSF1-205ENST00000582730 IMP4Q96G21 291 aaKnown RBP13.78□□□□□ -0.2
SRSF1-205ENST00000582730 OR52B2Q96RD2 323 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 NUF2Q9BZD4 464 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 PRKD2Q9BZL6 878 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 CYP4F12Q9HCS2 524 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 HMX1Q9NP08 348 aaPredicted RBP13.78□□□□□ -0.2
SRSF1-205ENST00000582730 SORCS3Q9UPU3 1222 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 PATJQ8NI35 1801 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 TBKBP1A7MCY6 615 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 ZNF195O14628 629 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 ENPP3O14638 875 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 EPHA3P29320 983 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 MAGEA11P43364 429 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 KCNQ1P51787 676 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 NRG1Q02297 640 aaPredicted RBP13.78□□□□□ -0.2
SRSF1-205ENST00000582730 DSG1Q02413 1049 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 ZNF235Q14590 738 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 LIN52Q52LA3 116 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 RALGPS1Q5JS13 557 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 PTCD2Q8WV60 388 aaKnown RBP13.78□□□□□ -0.2
SRSF1-205ENST00000582730 NCSTNQ92542 709 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 MYEOVQ96EZ4 313 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 TTC1Q99614 292 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 SEMA3CQ99985 751 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 ECSITQ9BQ95 431 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 VCX3BQ9H321 246 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 VCX3AQ9NNX9 186 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 TCF7L2Q9NQB0 619 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 TREX1Q9NSU2 369 aa13.78□□□□□ -0.2
SRSF1-205ENST00000582730 NEMP2A6NFY4 417 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 OR51F1A6NGY5 319 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 WASH4PA8MWX3 477 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 ARVCFO00192 962 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 TM7SF2O76062 418 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 BAG2O95816 211 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 PIRTP0C851 137 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 ETS2P15036 469 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 RPL17P18621 184 aaKnown RBP13.77□□□□□ -0.2
SRSF1-205ENST00000582730 SERPINB5P36952 375 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 DLG1Q12959 904 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 RIPOR1Q6ZS17 1223 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 CNTN4Q8IWV2 1026 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 KLHDC8BQ8IXV7 354 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 LGI2Q8N0V4 545 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 C2CD4AQ8NCU7 369 aaPredicted RBP13.77□□□□□ -0.2
SRSF1-205ENST00000582730 BLOC1S5Q8TDH9 187 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 DTNBP1Q96EV8 351 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 OLA1Q9NTK5 396 aaKnown RBP13.77□□□□□ -0.2
SRSF1-205ENST00000582730 MARCH5Q9NX47 278 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 SLC7A8Q9UHI5 535 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 BPTFQ12830 3046 aa13.77□□□□□ -0.2
SRSF1-205ENST00000582730 F8W8V4 182 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 DLX3O60479 287 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 MAGEC1O60732 1142 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 H2AFYO75367 372 aaKnown RBP13.77□□□□□ -0.21
SRSF1-205ENST00000582730 PDE5AO76074 875 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 SLC4A1P02730 911 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 SBK3P0C264 359 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 EML3Q32P44 896 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 TSTD2Q5T7W7 516 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 SEL1L3Q68CR1 1132 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 TAS1R1Q7RTX1 841 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 ZNF683Q8IZ20 524 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 EFCAB3Q8N7B9 438 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 OR6Y1Q8NGX8 325 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 SHKBP1Q8TBC3 707 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 HEXDCQ8WVB3 486 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 CAPNS2Q96L46 248 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 PANX3Q96QZ0 392 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 SPON2Q9BUD6 331 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.77□□□□□ -0.21
SRSF1-205ENST00000582730 CLIC5Q9NZA1 410 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 KCTD3Q9Y597 815 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 RNASEH1O60930 286 aaKnown RBP13.77□□□□□ -0.21
SRSF1-205ENST00000582730 CRABP2P29373 138 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 PLK1P53350 603 aa13.77□□□□□ -0.21
SRSF1-205ENST00000582730 FSCBQ5H9T9 825 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms