RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 YAF2Q8IY57 180 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 C4orf33Q8N1A6 199 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TTC30BQ8N4P2 665 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MDGA1Q8NFP4 955 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FRS2Q8WU20 508 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MZB1Q8WU39 189 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NAT14Q8WUY8 206 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SLC44A1Q8WWI5 657 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 EZH1Q92800 747 aaPredicted RBP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TTC17Q96AE7 1141 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 OTUB2Q96DC9 234 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LRRC39Q96DD0 335 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CCDC97Q96F63 343 aaPredicted RBP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 IFT43Q96FT9 208 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ATXN7L3BQ96GX2 97 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SERAC1Q96JX3 654 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CDX2Q99626 313 aaPredicted RBP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SELENOSQ9BQE4 189 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KIFC1Q9BW19 673 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FRMD8Q9BZ67 464 aaPredicted RBP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TSPYL1Q9H0U9 437 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ACBD3Q9H3P7 528 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 RABEP2Q9H5N1 569 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 RETREG1Q9H6L5 497 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ZDHHC6Q9H6R6 413 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 UBE2ZQ9H832 354 aaPredicted RBP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 BPIFA1Q9NP55 256 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MLXIPLQ9NP71 852 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PPANQ9NQ55 473 aaKnown RBP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 VPS45Q9NRW7 570 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 IARS2Q9NSE4 1012 aaKnown RBP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TREX1Q9NSU2 369 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 C20orf96Q9NUD7 363 aaPredicted RBP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 POLR3BQ9NW08 1133 aaPredicted RBP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 OBP2AQ9NY56 170 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GOLGA6AQ9NYA3 693 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MOCS1Q9NZB8 636 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LMCD1Q9NZU5 365 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SAMD15Q9P1V8 674 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LGALS13Q9UHV8 139 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 HS3ST2Q9Y278 367 aa6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FNDC3AQ9Y2H6 1198 aaKnown RBP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 RANBP2P49792 3224 aaKnown RBP6.2□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FAM237BA0A1B0GVD1 139 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CCDC162PA2VCL2 907 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TRIM49D1C9J1S8 452 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ANHXE9PGG2 379 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MBTPS2O43462 519 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LDB2O43679 373 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NARSO43776 548 aaKnown RBP6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 FZD6O60353 706 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ALDH1A2O94788 518 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 VAPBO95292 243 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PGLSO95336 258 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 IGSF6O95976 241 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 UGT2B4P06133 528 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CHRM1P11229 460 aaPredicted RBP6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TSHRP16473 764 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PSMC3P17980 439 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 POU3F3P20264 500 aaPredicted RBP6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 NR1D1P20393 614 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GABRB3P28472 473 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 STX2P32856 288 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PHBP35232 272 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MSH2P43246 934 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ARCN1P48444 511 aaKnown RBP6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CDKN1CP49918 316 aaPredicted RBP6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ZNF140P52738 457 aaPredicted RBP6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SEC13P55735 322 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GEMIN4P57678 1058 aaKnown RBP6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 AP1S1P61966 158 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MGAT5Q09328 741 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 RUNX3Q13761 415 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SEMA3AQ14563 771 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KLHL38Q2WGJ6 581 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 MYLK3Q32MK0 819 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 INO80DQ53TQ3 878 aaPredicted RBP6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CARD16Q5EG05 197 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SPANXN3Q5MJ09 141 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TEDDM1Q5T9Z0 273 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PACS1Q6VY07 963 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CEP128Q6ZU80 1094 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LYSMD3Q7Z3D4 306 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 LINC00523Q86TU6 105 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TMEM135Q86UB9 458 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 EXOC3L1Q86VI1 746 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 KCNMB4Q86W47 210 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CACUL1Q86Y37 369 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 TDRPQ86YL5 185 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 SRRM1Q8IYB3 904 aaKnown RBP6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 AHI1Q8N157 1196 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 STK40Q8N2I9 435 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 BBS5Q8N3I7 341 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 CPA6Q8N4T0 437 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 GOLGA6L1Q8N7Z2 621 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 ANKRD42Q8N9B4 389 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 PPHLN1Q8NEY8 458 aaKnown RBP6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 OR2AP1Q8NGE2 309 aa6.19□□□□□ -1.42
RNU4ATAC-201ENST00000580972 OR13J1Q8NGT2 312 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms