RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 APOLD1Q96LR9 279 aa21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 BZW2Q9Y6E2 419 aaKnown RBP21.5■■□□□ 1.03
CSNK1D-215ENST00000580784 TSPAN11A1L157 253 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 K7ESM1 405 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 CKMT1AP12532 417 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 JUNDP17535 347 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 PCK1P35558 622 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 SUOXP51687 545 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 THOP1P52888 689 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 INSM1Q01101 510 aaPredicted RBP21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 ELP6Q0PNE2 266 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 EIF2B5Q13144 721 aaKnown RBP21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 DPYSQ14117 519 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 GRM3Q14832 879 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 ZSWIM9Q86XI8 627 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 TP53I13Q8NBR0 393 aaPredicted RBP21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 ZNF641Q96N77 438 aaPredicted RBP21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 THAP2Q9H0W7 228 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 SP110Q9HB58 689 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 PCDH12Q9NPG4 1184 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 CAPN11Q9UMQ6 739 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 COQ6Q9Y2Z9 468 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 GPSM3Q9Y4H4 160 aa21.49■■□□□ 1.03
CSNK1D-215ENST00000580784 ASXL3Q9C0F0 2248 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 LY6G6EA0A0G2JKS1 128 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 H3BM21 787 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 PRKCGP05129 697 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 SERPING1P05155 500 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 CSNK1DP48730 415 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 ZNF135P52742 658 aaPredicted RBP21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 ZBED6P86452 979 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 E2F1Q01094 437 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 SEMG2Q02383 582 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 IL10RBQ08334 325 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 ACAP1Q15027 740 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 SMTNL2Q2TAL5 461 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 RFFLQ8WZ73 363 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 BTBD6Q96KE9 485 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 TUBGCP5Q96RT8 1024 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 C1QTNF7Q9BXJ2 289 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 TCEAL2Q9H3H9 227 aaPredicted RBP21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 ZWILCHQ9H900 591 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 PNMA8BQ9ULN7 279 aaPredicted RBP21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 LHX6Q9UPM6 363 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 U3KQA8 63 aa21.48■■□□□ 1.03
CSNK1D-215ENST00000580784 GOLGA6L19H0YKK7 550 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 RIOK3O14730 519 aaKnown RBP21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 MUSKO15146 869 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 AQP9O43315 295 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 AMPD1P23109 780 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 EIF4A3P38919 411 aaKnown RBP21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 YPEL5P62699 121 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 PTK2BQ14289 1009 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 IRF4Q15306 451 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 NFKBIBQ15653 356 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 DPYSL2Q16555 572 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 BOLA3Q53S33 107 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 CFAP58Q5T655 872 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 TXNRD3NBQ6F5E7 133 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 BRAT1Q6PJG6 821 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 RBFAQ8N0V3 343 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 FAM181AQ8N9Y4 354 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 LMX1AQ8TE12 382 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 HSPH1Q92598 858 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 DUSP23Q9BVJ7 150 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 CINPQ9BW66 212 aaPredicted RBP21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 ATP13A3Q9H7F0 1226 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 ETNK2Q9NVF9 386 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 IFNKQ9P0W0 207 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 CLCA2Q9UQC9 943 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 CSNK1G3Q9Y6M4 447 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 SHROOM3Q8TF72 1996 aa21.47■■□□□ 1.03
CSNK1D-215ENST00000580784 A0A087X0T9 212 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 H3BRJ5 948 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 FAM228BP0C875 321 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 RARAP10276 462 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 C6P13671 934 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 ARL4AP40617 200 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 NSUN2Q08J23 767 aaKnown RBP eCLIP21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 C1orf61Q13536 156 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 PIGHQ14442 188 aaPredicted RBP21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 LRRC14Q15048 493 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 WSCD2Q2TBF2 565 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 DEFB133Q30KQ1 61 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 ERAP2Q6P179 960 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 POLNQ7Z5Q5 900 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 CACTIN-AS1Q8N1I8 211 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 LZTR1Q8N653 840 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 HNRNPLLQ8WVV9 542 aaKnown RBP21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 NXPE2Q96DL1 559 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 NSMCE3Q96MG7 304 aa21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 LUC7L2Q9Y383 392 aaKnown RBP21.46■■□□□ 1.03
CSNK1D-215ENST00000580784 GCATO75600 419 aa21.45■■□□□ 1.02
CSNK1D-215ENST00000580784 MT-CO3P00414 261 aa21.45■■□□□ 1.02
CSNK1D-215ENST00000580784 GYPCP04921 128 aa21.45■■□□□ 1.02
CSNK1D-215ENST00000580784 SERPINA4P29622 427 aa21.45■■□□□ 1.02
CSNK1D-215ENST00000580784 MMP12P39900 470 aa21.45■■□□□ 1.02
CSNK1D-215ENST00000580784 LIG3P49916 1009 aa21.45■■□□□ 1.02
CSNK1D-215ENST00000580784 SCNN1BP51168 640 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms