RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 PPP1R16AQ96I34 528 aa6.11□□□□□ -1.43
CCDC178-209ENST00000579947 OLA1Q9NTK5 396 aaKnown RBP6.11□□□□□ -1.43
CCDC178-209ENST00000579947 INTS13Q9NVM9 706 aa6.11□□□□□ -1.43
CCDC178-209ENST00000579947 TYW5A2RUC4 315 aaKnown RBP6.1□□□□□ -1.43
CCDC178-209ENST00000579947 TISP43B9A030 160 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 GABBR2O75899 941 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 STAU1O95793 577 aaKnown RBP6.1□□□□□ -1.43
CCDC178-209ENST00000579947 TNNC2P02585 160 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 HMGB1P09429 215 aaKnown RBP6.1□□□□□ -1.43
CCDC178-209ENST00000579947 NDST1P52848 882 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 RPS18P62269 152 aaKnown RBP6.1□□□□□ -1.43
CCDC178-209ENST00000579947 NFATC4Q14934 902 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 TSGA10IPQ3SY00 556 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 FAAH2Q6GMR7 532 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 RPUSD3Q6P087 351 aaKnown RBP6.1□□□□□ -1.43
CCDC178-209ENST00000579947 WDR74Q6RFH5 385 aaPredicted RBP6.1□□□□□ -1.43
CCDC178-209ENST00000579947 CLEC20AQ6ZU45 233 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 FAM186BQ8IYM0 893 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 ARFGAP1Q8N6T3 406 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 PPP4R1Q8TF05 950 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 TAF4BQ92750 862 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 RUFY1Q96T51 708 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 LIME1Q9H400 295 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 RBAKQ9NYW8 714 aaPredicted RBP6.1□□□□□ -1.43
CCDC178-209ENST00000579947 KLQ9UEF7 1012 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 ANKRD34CP0C6C1 535 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 FAM200BP0CF97 657 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 ADRB3P13945 408 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 CCDC130P13994 396 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 VAV2P52735 878 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 RPS15P62841 145 aaKnown RBP6.1□□□□□ -1.43
CCDC178-209ENST00000579947 TNNC1P63316 161 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 TRIM29Q14134 588 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 TCEA2Q15560 299 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 HGSNATQ68CP4 663 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 Q6ZVU0 165 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 CHD1LQ86WJ1 897 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 TP53I13Q8NBR0 393 aaPredicted RBP6.1□□□□□ -1.43
CCDC178-209ENST00000579947 SLC2A14Q8TDB8 520 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 BRF1Q92994 677 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 RNF34Q969K3 372 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 RMND5BQ96G75 393 aaPredicted RBP6.1□□□□□ -1.43
CCDC178-209ENST00000579947 FAM213AQ9BRX8 229 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 ZDHHC6Q9H6R6 413 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 ARHGEF38Q9NXL2 777 aa6.1□□□□□ -1.43
CCDC178-209ENST00000579947 GOLGA6L7A0A1B0GV03 622 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 ZWINTO95229 277 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 IL11RAQ14626 422 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 LBRQ14739 615 aaKnown RBP6.09□□□□□ -1.43
CCDC178-209ENST00000579947 MYBPC3Q14896 1274 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 DLG2Q15700 870 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 KRTAP24-1Q3LI83 254 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 RNF20Q5VTR2 975 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 PAMR1Q6UXH9 720 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 GFRALQ6UXV0 394 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 Q6ZUG5 572 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 DMRTC2Q8IXT2 367 aaPredicted RBP6.09□□□□□ -1.43
CCDC178-209ENST00000579947 POMGNT1Q8WZA1 660 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 SGSM3Q96HU1 749 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 CCDC114Q96M63 670 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 DDX50Q9BQ39 737 aaKnown RBP6.09□□□□□ -1.43
CCDC178-209ENST00000579947 TRIM56Q9BRZ2 755 aaKnown RBP6.09□□□□□ -1.43
CCDC178-209ENST00000579947 MMTAG2Q9BU76 263 aaKnown RBP6.09□□□□□ -1.43
CCDC178-209ENST00000579947 DPEP2Q9H4A9 486 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 NCOA5Q9HCD5 579 aaKnown RBP6.09□□□□□ -1.43
CCDC178-209ENST00000579947 SERTAD1Q9UHV2 236 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 SLC25A13Q9UJS0 675 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 ODF2LQ9ULJ1 636 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 CYP46A1Q9Y6A2 500 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 ATE1O95260 518 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 LDHAP00338 332 aaKnown RBP6.09□□□□□ -1.43
CCDC178-209ENST00000579947 GSPT1P15170 499 aaKnown RBP6.09□□□□□ -1.43
CCDC178-209ENST00000579947 XBP1P17861 261 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 HTR1BP28222 390 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 KRT2P35908 639 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 EVCP57679 992 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 ORC2Q13416 577 aaPredicted RBP6.09□□□□□ -1.43
CCDC178-209ENST00000579947 ENPP7Q6UWV6 458 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 TMEM207Q6UWW9 146 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 ADAMTS18Q8TE60 1221 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 NT5C1BQ96P26 610 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 C1QTNF7Q9BXJ2 289 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 AGXT2Q9BYV1 514 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 ZNF552Q9H707 407 aaPredicted RBP6.09□□□□□ -1.43
CCDC178-209ENST00000579947 STMN3Q9NZ72 180 aa6.09□□□□□ -1.43
CCDC178-209ENST00000579947 FARSAQ9Y285 508 aaKnown RBP6.09□□□□□ -1.43
CCDC178-209ENST00000579947 CHD5Q8TDI0 1954 aa6.09□□□□□ -1.44
CCDC178-209ENST00000579947 RYR3Q15413 4870 aa6.09□□□□□ -1.44
CCDC178-209ENST00000579947 PRRC2CQ9Y520 2896 aaKnown RBP6.09□□□□□ -1.44
CCDC178-209ENST00000579947 A8MU76 341 aa6.09□□□□□ -1.44
CCDC178-209ENST00000579947 RNF103O00237 685 aa6.09□□□□□ -1.44
CCDC178-209ENST00000579947 ACSL4O60488 711 aa6.09□□□□□ -1.44
CCDC178-209ENST00000579947 PRPF6O94906 941 aaKnown RBP6.09□□□□□ -1.44
CCDC178-209ENST00000579947 IGLV3-27P01718 113 aa6.09□□□□□ -1.44
CCDC178-209ENST00000579947 FGF5P12034 268 aa6.09□□□□□ -1.44
CCDC178-209ENST00000579947 SLC11A2P49281 568 aa6.09□□□□□ -1.44
CCDC178-209ENST00000579947 CASP6P55212 293 aa6.09□□□□□ -1.44
CCDC178-209ENST00000579947 YWHAGP61981 247 aaKnown RBP eCLIP6.09□□□□□ -1.44
CCDC178-209ENST00000579947 NNTQ13423 1086 aa6.09□□□□□ -1.44
CCDC178-209ENST00000579947 RAPSNQ13702 412 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms