RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 UPK3BL1B0FP48 263 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 UPK3BL2E5RIL1 263 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 MATN3O15232 486 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 YKT6O15498 198 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 FLRT2O43155 660 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 NRDCO43847 1150 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 MTA2O94776 668 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 LCA5LO95447 670 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 JCHAINP01591 159 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 WNT1P04628 370 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 PRKCGP05129 697 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 ZNF883P0CG24 379 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 CCNB1P14635 433 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 ITIH2P19823 946 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 CA4P22748 312 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 CES1P23141 567 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 CCNCP24863 283 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 GARSP41250 739 aaKnown RBP6.61□□□□□ -1.35
TRAF4-213ENST00000578917 ABL2P42684 1182 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 GRK6P43250 576 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 TNNT3P45378 269 aaPredicted RBP6.61□□□□□ -1.35
TRAF4-213ENST00000578917 RGRP47804 291 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 LIG3P49916 1009 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 MAXP61244 160 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 BNC1Q01954 994 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 SEMG2Q02383 582 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 GBE1Q04446 702 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 KIF5AQ12840 1032 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 FOXC1Q12948 553 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 TFDP2Q14188 446 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 PTK2BQ14289 1009 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 LRRC14Q15048 493 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 ACOX1Q15067 660 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 PAFAH1B3Q15102 231 aaKnown RBP6.61□□□□□ -1.35
TRAF4-213ENST00000578917 PDK1Q15118 436 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 LLGL1Q15334 1064 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 TMEM259Q4ZIN3 620 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 DENND2CQ68D51 928 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 NCBP2-AS2Q69YL0 99 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 CCDC70Q6NSX1 233 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 BZW1Q7L1Q6 419 aaKnown RBP6.61□□□□□ -1.35
TRAF4-213ENST00000578917 GATAD2AQ86YP4 633 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 RCOR2Q8IZ40 523 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 EID2Q8N6I1 236 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 FAM174AQ8TBP5 190 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 KIAA1524Q8TCG1 905 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 TSC1Q92574 1164 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 FAM131CQ96AQ9 280 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 CALR3Q96L12 384 aaKnown RBP6.61□□□□□ -1.35
TRAF4-213ENST00000578917 SEMA3CQ99985 751 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 FERMT1Q9BQL6 677 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 ORAI3Q9BRQ5 295 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 C1QTNF2Q9BXJ5 285 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 POLR1EQ9GZS1 481 aaKnown RBP6.61□□□□□ -1.35
TRAF4-213ENST00000578917 GGT7Q9UJ14 662 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 TFR2Q9UP52 801 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 ZFR2Q9UPR6 939 aaKnown RBP6.61□□□□□ -1.35
TRAF4-213ENST00000578917 APOBEC2Q9Y235 224 aaKnown RBP6.61□□□□□ -1.35
TRAF4-213ENST00000578917 PCDHGB2Q9Y5G2 931 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 HS3ST3A1Q9Y663 406 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 ACACBO00763 2458 aa6.61□□□□□ -1.35
TRAF4-213ENST00000578917 TPRP12270 2363 aaKnown RBP6.61□□□□□ -1.35
TRAF4-213ENST00000578917 CACNA1EQ15878 2313 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 EPG5Q9HCE0 2579 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 A0A0A6YYK5 440 aaPredicted RBP6.6□□□□□ -1.35
TRAF4-213ENST00000578917 A0A1B0GTQ1 180 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 A0A1W2PQ67 120 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 A0A1W2PR77 199 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 MACROD2A1Z1Q3 448 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 GOLGA6CA6NDK9 693 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 GOLGA6BA6NDN3 693 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 POM121BA6NF01 834 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 NEMP2A6NFY4 417 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 KCNK1O00180 336 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 RIOK3O14730 519 aaKnown RBP6.6□□□□□ -1.35
TRAF4-213ENST00000578917 PPP1R12AO14974 1030 aaPredicted RBP6.6□□□□□ -1.35
TRAF4-213ENST00000578917 AREL1O15033 823 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 MUSKO15146 869 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 MFSD11O43934 449 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 PCDHGA12O60330 932 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 CST8O60676 142 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 SDC3O75056 442 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 GJB3O75712 270 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 LDOC1O95751 146 aaPredicted RBP6.6□□□□□ -1.35
TRAF4-213ENST00000578917 ADRB1P08588 477 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 ELFN1P0C7U0 828 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 GOLGA6DP0CG33 693 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 CTNNA2P26232 953 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 HTR1BP28222 390 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 CDC25BP30305 580 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 RABIFP47224 123 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 ARSEP51690 589 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 GSDMDP57764 484 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 GALNT2Q10471 571 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 BNIP3Q12983 259 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 PDE1CQ14123 709 aaPredicted RBP6.6□□□□□ -1.35
TRAF4-213ENST00000578917 ARHGEF7Q14155 803 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 TCEAL1Q15170 157 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 ZNF423Q2M1K9 1284 aa6.6□□□□□ -1.35
TRAF4-213ENST00000578917 ZNF542PQ5EBM4 170 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms