RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 GDF3Q9NR23 364 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 VPS45Q9NRW7 570 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 WHRNQ9P202 907 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 DUSP12Q9UNI6 340 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 PLA2G4CQ9UP65 541 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 SORCS3Q9UPU3 1222 aa8.12□□□□□ -1.11
COPS3-215ENST00000578317 CDC14CA4D256 554 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TBC1D3BA6NDS4 549 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 ERI2A8K979 691 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 H3BM21 787 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 MAN2B1O00754 1011 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TP73O15350 636 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 ZNF821O75541 412 aaPredicted RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 TMCC1O94876 653 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 HEXIM1O94992 359 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 KAT7O95251 611 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 METTL18O95568 372 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 EPOP01588 193 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 APODP05090 189 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 HNRNPLP14866 589 aaKnown RBP eCLIP8.11□□□□□ -1.11
COPS3-215ENST00000578317 NFKB1P19838 968 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 DRD1P21728 446 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 NRLP54845 237 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 SLC7A5Q01650 507 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 CAV1Q03135 178 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 MESP2Q0VG99 397 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 HYAL2Q12891 473 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 GPS1Q13098 491 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 SEMA5AQ13591 1074 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 ENPP2Q13822 863 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 SLC14A2Q15849 920 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 ERCC6LQ2NKX8 1250 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TMEM196Q5HYL7 178 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TEX35Q5T0J7 233 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 WDR93Q6P2C0 686 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 ARHGEF18Q6ZSZ5 1173 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 HOOK3Q86VS8 718 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 ATP11CQ8NB49 1132 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 ABHD17AQ96GS6 310 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 AGAP3Q96P47 875 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TCF12Q99081 682 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 P2RY13Q9BPV8 354 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 POLR1EQ9GZS1 481 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 GBA3Q9H227 469 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 ANKZF1Q9H8Y5 726 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 EPB41L5Q9HCM4 733 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 FBRSL1Q9HCM7 1045 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 SEPT10Q9P0V9 454 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 KLHL8Q9P2G9 620 aaPredicted RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 WNT16Q9UBV4 365 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 ASIC3Q9UHC3 531 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 SLC25A13Q9UJS0 675 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TPX2Q9ULW0 747 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 ERVW-1Q9UQF0 538 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 AAR2Q9Y312 384 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 PIAS3Q9Y6X2 628 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 DENND4AQ7Z401 1863 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 NUP210Q8TEM1 1887 aaPredicted RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 SHISA7A6NL88 538 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 DNALI1O14645 258 aaPredicted RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 MUSKO15146 869 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 PSMD3O43242 534 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 SMAD6O43541 496 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 ANXA9O76027 345 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 NEBLO76041 1014 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 SEC31AO94979 1220 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 HLA-DQB2P05538 268 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 SRCP12931 536 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 MCM3P25205 808 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TNFRSF8P28908 595 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 MRPS25P82663 173 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 GUCY2DQ02846 1103 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 PLAURQ03405 335 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 PRKCQQ04759 706 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 CUL1Q13616 776 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 PRPSAP1Q14558 356 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 ZNF235Q14590 738 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 MORF4L2Q15014 288 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TRIP13Q15645 432 aaPredicted RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 DLG2Q15700 870 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 FBXO43Q4G163 708 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 DGKKQ5KSL6 1271 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 KCTD11Q693B1 232 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TXNDC11Q6PKC3 985 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 LINGO4Q6UY18 593 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 PRUNE1Q86TP1 453 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 CCNJLQ8IV13 435 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 UBALD2Q8IYN6 164 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 PGBD5Q8N414 524 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 PCDH20Q8N6Y1 951 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 MCUQ8NE86 351 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TTC8Q8TAM2 541 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 ARRDC2Q8TBH0 407 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 FRS2Q8WU20 508 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 UCMAQ8WVF2 138 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 IMP4Q96G21 291 aaKnown RBP8.11□□□□□ -1.11
COPS3-215ENST00000578317 SNF8Q96H20 258 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TMEM74Q96NL1 305 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 NUDCD1Q96RS6 583 aa8.11□□□□□ -1.11
COPS3-215ENST00000578317 TRIM51Q9BSJ1 452 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms