RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 PEBP4Q96S96 227 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 NCAPGQ9BPX3 1015 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 LRRC61Q9BV99 259 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 RTN4Q9NQC3 1192 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PARVAQ9NVD7 372 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 SPASTQ9UBP0 616 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 SALL4Q9UJQ4 1053 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 KIF26BQ2KJY2 2108 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TMCO5BA8MYB1 307 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 EIF3CLB5ME19 914 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 J3KR12 359 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TOR1BO14657 336 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 RIOK3O14730 519 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 GCATO75600 419 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TNFAIP3P21580 790 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 NDST2P52849 883 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ACAP1Q15027 740 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ANO6Q4KMQ2 910 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PRRT3Q5FWE3 981 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 E4F1Q66K89 784 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CYP4V2Q6ZWL3 525 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 EFL1Q7Z2Z2 1120 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 HCAR2Q8TDS4 363 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 EIF3CQ99613 913 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 IL12RB2Q99665 862 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 SNRNP25Q9BV90 132 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 BOCQ9BWV1 1114 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ABCG4Q9H172 646 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 DHX35Q9H5Z1 703 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PCDH12Q9NPG4 1184 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 DONSONQ9NYP3 566 aa16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 GCN1Q92616 2671 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-206ENST00000578018 MGAQ8IWI9 3026 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 KALRNO60229 2985 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 EME2A4GXA9 379 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 LMO7DNF2Z398 122 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 EEF2KO00418 725 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 MPOP05164 745 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TGM2P21980 687 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 XPAP23025 273 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 EIF4A3P38919 411 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 MMP12P39900 470 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 C1orf61Q13536 156 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 GRM3Q14832 879 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 NFKBIBQ15653 356 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 UGP2Q16851 508 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 AFMIDQ63HM1 303 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 RFX8Q6ZV50 586 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ZSWIM9Q86XI8 627 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ZNF641Q96N77 438 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TUBGCP5Q96RT8 1024 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 KCTD15Q96SI1 283 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 BPIFA3Q9BQP9 254 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TRIM7Q9C029 511 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 SLC39A8Q9C0K1 460 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 NAT10Q9H0A0 1025 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 SUV39H2Q9H5I1 410 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PRORYQ9H606 182 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 COQ6Q9Y2Z9 468 aa16.79■□□□□ 0.28
CDK5RAP3-206ENST00000578018 HELZ2Q9BYK8 2649 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CPED1A4D0V7 1026 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TMEM191CA6NGB0 347 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ARHGAP42A6NI28 874 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 BUB1BO60566 1050 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 USP12O75317 370 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 DXOO77932 396 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 C6P13671 934 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 RGRP47804 291 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PAPOLAP51003 745 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ADKP55263 362 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 GABREP78334 506 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PPARDQ03181 441 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 LRRC14Q15048 493 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 NR0B2Q15466 257 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ASIC2Q16515 512 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ISXQ2M1V0 245 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 WSCD2Q2TBF2 565 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 C6orf132Q5T0Z8 1188 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ERMARDQ5T6L9 678 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 BRAT1Q6PJG6 821 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CAMK1DQ8IU85 385 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ARHGAP12Q8IWW6 846 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 SLC35F3Q8IY50 421 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 NPWQ8N729 165 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TSEN2Q8NCE0 465 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 FNIP1Q8TF40 1166 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 SLC13A1Q9BZW2 595 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CLPBQ9H078 707 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 HAUS4Q9H6D7 363 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PCSK1NQ9UHG2 260 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ATP8A1Q9Y2Q0 1164 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 RAI2Q9Y5P3 530 aa16.78■□□□□ 0.28
CDK5RAP3-206ENST00000578018 MUSKO15146 869 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CELA2BP08218 269 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TSHRP16473 764 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ERCC2P18074 760 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 MIPP30301 263 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PRKCIP41743 596 aa16.77■□□□□ 0.28
CDK5RAP3-206ENST00000578018 LSSP48449 732 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms