RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 KDM4CQ9H3R0 1056 aa12.81□□□□□ -0.36
MKS1-206ENST00000577824 CD93Q9NPY3 652 aa12.81□□□□□ -0.36
MKS1-206ENST00000577824 BCCIPQ9P287 314 aaKnown RBP eCLIP12.81□□□□□ -0.36
MKS1-206ENST00000577824 AAR2Q9Y312 384 aaKnown RBP12.81□□□□□ -0.36
MKS1-206ENST00000577824 PCDHGC4Q9Y5F7 938 aa12.81□□□□□ -0.36
MKS1-206ENST00000577824 RAI2Q9Y5P3 530 aa12.81□□□□□ -0.36
MKS1-206ENST00000577824 FRYLO94915 3013 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 CACNA1IQ9P0X4 2223 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 IGHV1OR15-9A0A0B4J2B8 117 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 LOC285095A0A1B0GVY8 99 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 A0A1W2PP55 124 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 ERI2A8K979 691 aaKnown RBP12.8□□□□□ -0.36
MKS1-206ENST00000577824 AREL1O15033 823 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 CPP00450 1065 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 IFNB1P01574 187 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 SP9P0CG40 484 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 OXTRP30559 389 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 RPL22P35268 128 aaKnown RBP12.8□□□□□ -0.36
MKS1-206ENST00000577824 ADRA1AP35348 466 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 ACTN2P35609 894 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 PTGIRP43119 386 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 GRIA4P48058 902 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 ADPRHP54922 357 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 GEMP55040 296 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 CSTF1Q05048 431 aaKnown RBP12.8□□□□□ -0.36
MKS1-206ENST00000577824 ITKQ08881 620 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 CCDC15Q0P6D6 951 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 CNTN1Q12860 1018 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 PTK6Q13882 451 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 UGP2Q16851 508 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 FAM182AQ5T1J6 154 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 TSSK4Q6SA08 328 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 GSTA5Q7RTV2 222 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 CACUL1Q86Y37 369 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 CCHCR1Q8TD31 782 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 PIH1D2Q8WWB5 315 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 ERLEC1Q96DZ1 483 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 MRGPRX2Q96LB1 330 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 LYSMD1Q96S90 227 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 MLPHQ9BV36 600 aaPredicted RBP12.8□□□□□ -0.36
MKS1-206ENST00000577824 TPSD1Q9BZJ3 242 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 SGK2Q9HBY8 427 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 DYRK4Q9NR20 520 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 EIF2B3Q9NR50 452 aaKnown RBP12.8□□□□□ -0.36
MKS1-206ENST00000577824 FBXL12Q9NXK8 326 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 PCDHGA2Q9Y5H1 932 aa12.8□□□□□ -0.36
MKS1-206ENST00000577824 CAPN8A6NHC0 703 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 UPK3BL1B0FP48 263 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 UPK3BL2E5RIL1 263 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 LILRB5O75023 590 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 RNASEH2AO75792 299 aaKnown RBP12.79□□□□□ -0.36
MKS1-206ENST00000577824 SUN1O94901 812 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 AP2A1O95782 977 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 KRT14P02533 472 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 PDHA1P08559 390 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 ATXN1LP0C7T5 689 aaKnown RBP12.79□□□□□ -0.36
MKS1-206ENST00000577824 ZSCAN5DPP0CG00 497 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 ETS1P14921 441 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 CNR2P34972 360 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 MMP12P39900 470 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 ABL2P42684 1182 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 PXNP49023 591 aaPredicted RBP12.79□□□□□ -0.36
MKS1-206ENST00000577824 WNT3AP56704 352 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 TAS2R38P59533 333 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 POLR2LP62875 67 aaKnown RBP12.79□□□□□ -0.36
MKS1-206ENST00000577824 DR1Q01658 176 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 CDK18Q07002 472 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 C2orf54Q08AI8 447 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 PRPSAP1Q14558 356 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 ARMC12Q5T9G4 340 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 HDDC3Q8N4P3 179 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 MNS1Q8NEH6 495 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 SPACA7Q96KW9 195 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 PCED1AQ9H1Q7 454 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 KCNH6Q9H252 994 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 NEUROG2Q9H2A3 272 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 ARNT2Q9HBZ2 717 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 PREBQ9HCU5 417 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 ZSCAN32Q9NX65 697 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 WSB2Q9NYS7 404 aaPredicted RBP12.79□□□□□ -0.36
MKS1-206ENST00000577824 NCKAP1Q9Y2A7 1128 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 PCDHB9Q9Y5E1 797 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 FANCMQ8IYD8 2048 aa12.79□□□□□ -0.36
MKS1-206ENST00000577824 GOLGA6CA6NDK9 693 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 GOLGA6BA6NDN3 693 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 NDST3O95803 873 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 GOLGA6DP0CG33 693 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 TIMP2P16035 220 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 HLA-DPA1P20036 260 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 CD6P30203 668 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 FNTBP49356 437 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 CDK16Q00536 496 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 POM121L1PQ3SYA9 428 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 USP39Q53GS9 565 aaKnown RBP12.78□□□□□ -0.36
MKS1-206ENST00000577824 FBXL19Q6PCT2 694 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 RANBP10Q6VN20 620 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 DPPA4Q7L190 304 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 PRUNE1Q86TP1 453 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 C11orf74Q86VG3 221 aa12.78□□□□□ -0.36
MKS1-206ENST00000577824 JAMLQ86YT9 394 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms