RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 HTRA2O43464 458 aaPredicted RBP19.5■□□□□ 0.71
SS18-208ENST00000577751 KRT10P13645 584 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 CCNB1P14635 433 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 ITIH2P19823 946 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 CTNNA2P26232 953 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 CTSKP43235 329 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 MAXP61244 160 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 TFDP2Q14188 446 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 ALG1LQ6GMV1 187 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 NPNTQ6UXI9 565 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 NT5DC3Q86UY8 548 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 IQCHQ86VS3 1027 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 CCDC13Q8IYE1 715 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 CCNYQ8ND76 341 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 LRRN4Q8WUT4 740 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 ASB12Q8WXK4 309 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 KLK6Q92876 244 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 RBM41Q96IZ5 413 aaKnown RBP19.5■□□□□ 0.71
SS18-208ENST00000577751 ZNF830Q96NB3 372 aaPredicted RBP19.5■□□□□ 0.71
SS18-208ENST00000577751 LGMNQ99538 433 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 SLC17A9Q9BYT1 436 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 NOD2Q9HC29 1040 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 NT5MQ9NPB1 228 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 SCUBE2Q9NQ36 999 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 AASDHPPTQ9NRN7 309 aa19.5■□□□□ 0.71
SS18-208ENST00000577751 RBM22Q9NW64 420 aaKnown RBP eCLIP19.5■□□□□ 0.71
SS18-208ENST00000577751 MACROD2A1Z1Q3 448 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 CCDC66A2RUB6 948 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 GOLGA6L3A6NEY3 463 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 UPK3BL1B0FP48 263 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 UPK3BL2E5RIL1 263 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 NEMP1O14524 444 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 RIOK3O14730 519 aaKnown RBP19.49■□□□□ 0.71
SS18-208ENST00000577751 SLC31A1O15431 190 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 CST8O60676 142 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 OPHN1O60890 802 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 SOCS5O75159 536 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 PAK4O96013 591 aaPredicted RBP19.49■□□□□ 0.71
SS18-208ENST00000577751 PRLRP16471 622 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 HNRNPA2B1P22626 353 aaKnown RBP19.49■□□□□ 0.71
SS18-208ENST00000577751 ADCY2Q08462 1091 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 OVGP1Q12889 678 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 PPP2R5EQ16537 467 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 HLA-BQ31612 363 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 TMEM52BQ4KMG9 183 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 LRRC73Q5JTD7 316 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 ADAT2Q7Z6V5 191 aaKnown RBP19.49■□□□□ 0.71
SS18-208ENST00000577751 SKA1Q96BD8 255 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 IL12RB2Q99665 862 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 GAREM1Q9H706 876 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 PCDHGC4Q9Y5F7 938 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 LRRK1Q38SD2 2015 aa19.49■□□□□ 0.71
SS18-208ENST00000577751 A0A1W2PQ67 120 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 DCDC2BA2VCK2 349 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 IGLON5A6NGN9 336 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 TLR4O00206 839 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 CER1O95813 267 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 NR2C2P49116 596 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 C21orf59P57076 290 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 COPS2P61201 443 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 POLR2LP62875 67 aaKnown RBP19.48■□□□□ 0.71
SS18-208ENST00000577751 DYNLT1P63172 113 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 CCZ1BP86790 482 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 CCZ1P86791 482 aaPredicted RBP19.48■□□□□ 0.71
SS18-208ENST00000577751 ELP6Q0PNE2 266 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 SLC14A1Q13336 389 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 STAT4Q14765 748 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 PDK1Q15118 436 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 ZNF423Q2M1K9 1284 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 UAP1L1Q3KQV9 507 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 SLC45A4Q5BKX6 768 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 CFAP58Q5T655 872 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 BZW1Q7L1Q6 419 aaKnown RBP19.48■□□□□ 0.71
SS18-208ENST00000577751 RNF10Q8N5U6 811 aaKnown RBP19.48■□□□□ 0.71
SS18-208ENST00000577751 LENG8Q96PV6 779 aaPredicted RBP19.48■□□□□ 0.71
SS18-208ENST00000577751 KLF6Q99612 283 aaPredicted RBP19.48■□□□□ 0.71
SS18-208ENST00000577751 SEMA3CQ99985 751 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 POLR1EQ9GZS1 481 aaKnown RBP19.48■□□□□ 0.71
SS18-208ENST00000577751 BRD8Q9H0E9 1235 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 IL21RQ9HBE5 538 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 PCDH12Q9NPG4 1184 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 ATP8A1Q9Y2Q0 1164 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 HS3ST3A1Q9Y663 406 aa19.48■□□□□ 0.71
SS18-208ENST00000577751 KNL1Q8NG31 2342 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 PPP1R12AO14974 1030 aaPredicted RBP19.47■□□□□ 0.71
SS18-208ENST00000577751 ZNF883P0CG24 379 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 TGM2P21980 687 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 XPAP23025 273 aaPredicted RBP19.47■□□□□ 0.71
SS18-208ENST00000577751 CES1P23141 567 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 AKT2P31751 481 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 IFI35P80217 286 aaPredicted RBP19.47■□□□□ 0.71
SS18-208ENST00000577751 TRAF2Q12933 501 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 IHHQ14623 411 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 LLGL1Q15334 1064 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 KAZNQ674X7 775 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 ZNF662Q6ZS27 426 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 ABI3BPQ7Z7G0 1075 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 SYCE1Q8N0S2 351 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 CNTD1Q8N815 330 aa19.47■□□□□ 0.71
SS18-208ENST00000577751 ARRDC2Q8TBH0 407 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms