RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SPARCP09486 303 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 HOXC6P09630 235 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 GAGE12FP0CL80 117 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 GAGE12GP0CL81 117 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 GAGE12IP0CL82 117 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 PSG1P11464 419 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 CYP19A1P11511 503 aaPredicted RBP2.64□□□□□ -1.99
COPS3-213ENST00000577210 GNLYP22749 145 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 LMO1P25800 156 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 TTKP33981 857 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 RYKP34925 604 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 PTPN9P43378 593 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 GNAQP50148 359 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 POLGP54098 1239 aaPredicted RBP2.64□□□□□ -1.99
COPS3-213ENST00000577210 OLR1P78380 273 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 TFAP4Q01664 338 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 LRMPQ12912 555 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 GAGE1Q13065 139 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 GAGE4Q13068 117 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 KLF9Q13886 244 aaPredicted RBP2.64□□□□□ -1.99
COPS3-213ENST00000577210 PDE1CQ14123 709 aaPredicted RBP2.64□□□□□ -1.99
COPS3-213ENST00000577210 EIF4A2Q14240 407 aaKnown RBP2.64□□□□□ -1.99
COPS3-213ENST00000577210 LPIN1Q14693 890 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 ARHGEF6Q15052 776 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 TOMM20Q15388 145 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 C6orf141Q5SZD1 244 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 CCDC30Q5VVM6 783 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 TXNDC8Q6A555 127 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 ZNF425Q6IV72 752 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 CDC73Q6P1J9 531 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 FAM122CQ6P4D5 195 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 CFAP161Q6P656 301 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 LINGO2Q7L985 606 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 TBC1D1Q86TI0 1168 aaPredicted RBP2.64□□□□□ -1.99
COPS3-213ENST00000577210 CADM3Q8N126 398 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 ADSSL1Q8N142 457 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 PDILTQ8N807 584 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 BEST2Q8NFU1 509 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 RASSF8Q8NHQ8 419 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 METTL6Q8TCB7 284 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 FBXL8Q96CD0 374 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 MSI2Q96DH6 328 aaKnown RBP2.64□□□□□ -1.99
COPS3-213ENST00000577210 KLHL15Q96M94 604 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 TMEM68Q96MH6 324 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 ZNF570Q96NI8 536 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 SLITRK1Q96PX8 696 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 NR1H4Q96RI1 486 aaPredicted RBP2.64□□□□□ -1.99
COPS3-213ENST00000577210 SH3GL2Q99962 352 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 FAM234AQ9H0X4 552 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 SLC32A1Q9H598 525 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 WDR6Q9NNW5 1121 aaKnown RBP2.64□□□□□ -1.99
COPS3-213ENST00000577210 KRT84Q9NSB2 600 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 C20orf141Q9NUB4 165 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 DLGAP2Q9P1A6 1054 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 ORC3Q9UBD5 711 aaPredicted RBP2.64□□□□□ -1.99
COPS3-213ENST00000577210 WNT16Q9UBV4 365 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 AASSQ9UDR5 926 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 FBXO2Q9UK22 296 aaPredicted RBP2.64□□□□□ -1.99
COPS3-213ENST00000577210 LYVE1Q9Y5Y7 322 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 RPS6KL1Q9Y6S9 549 aa2.64□□□□□ -1.99
COPS3-213ENST00000577210 DDTLA6NHG4 134 aaPredicted RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 AKR1B15C9JRZ8 316 aaPredicted RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 H0YGN5 161 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 INO80B-WBP1J3KQ70 363 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 WNT9BO14905 357 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 SEC14L5O43304 696 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 ITM2AO43736 263 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 SLC25A17O43808 307 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 TACC1O75410 805 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 NDUFS3O75489 264 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 TSPAN9O75954 239 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 IPO7O95373 1038 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 TBX18O95935 607 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 CRYABP02511 175 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 HSP90AA1P07900 732 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 ACADMP11310 421 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 HOXB2P14652 356 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 NAGAP17050 411 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 TMEM11P17152 192 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 RRM1P23921 792 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 CDAP32320 146 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 RXRGP48443 463 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 NUDT6P53370 316 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 SETQ01105 290 aaPredicted RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 PKP1Q13835 747 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 KCTD2Q14681 263 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 CRYMQ14894 314 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 RNPS1Q15287 305 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 USP41Q3LFD5 358 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 SLC9B1Q4ZJI4 515 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 PPP6R3Q5H9R7 873 aaPredicted RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 ZNF667Q5HYK9 610 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 MZT2BQ6NZ67 158 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 METTL2BQ6P1Q9 378 aaKnown RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 CRELD2Q6UXH1 353 aaPredicted RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 KRBA2Q6ZNG9 492 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 H1FNTQ75WM6 255 aaPredicted RBP2.63□□□□□ -1.99
COPS3-213ENST00000577210 TECPR1Q7Z6L1 1165 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 TICAM1Q8IUC6 712 aa2.63□□□□□ -1.99
COPS3-213ENST00000577210 LURAP1LQ8IV03 231 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms