RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PLXNA2O75051 1894 aa6.4□□□□□ -1.39
NUP88-212ENST00000576708 TMEM131Q92545 1883 aa6.4□□□□□ -1.39
NUP88-212ENST00000576708 ZZEF1O43149 2961 aa6.4□□□□□ -1.39
NUP88-212ENST00000576708 IGF2RP11717 2491 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 PLXNB3Q9ULL4 1909 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 WDFY3Q8IZQ1 3526 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 A0A1B0GTQ1 180 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 EDDM13A0A1B0GTR0 161 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 A0A1W2PPC4 97 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 A0A1W2PR77 199 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 TARSL2A2RTX5 802 aaKnown RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 TYW5A2RUC4 315 aaKnown RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 C10orf142B7Z368 130 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 F5H5T6 163 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 I6L893 689 aaPredicted RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 RNF103O00237 685 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 FOXN3O00409 490 aaPredicted RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 VILLO15195 856 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 SHOXO15266 292 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 FLRT2O43155 660 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 KLF4O43474 513 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 MED7O43513 233 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 RNASEH1O60930 286 aaKnown RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 RTN2O75298 545 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 CNTN5O94779 1100 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 MOCS3O95396 460 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 IL1BP01584 269 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 CD8BP10966 210 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 PON1P27169 355 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 TPP2P29144 1249 aaPredicted RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 MAT2AP31153 395 aaKnown RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 DRD3P35462 400 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 CCT8P50990 548 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 ADPRHP54922 357 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 C21orf59P57076 290 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 RNASE9P60153 205 aaKnown RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 PPP2CBP62714 309 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 PPP2CAP67775 309 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 CDK17Q00537 523 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 NME3Q13232 169 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 CLEC16AQ2KHT3 1053 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 BBS9Q3SYG4 887 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 PTPN20Q4JDL3 420 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 OTUD1Q5VV17 481 aaPredicted RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 RNF219Q5W0B1 726 aaPredicted RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 OR6B2Q6IFH4 312 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 FOXR2Q6PJQ5 311 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 LRSAM1Q6UWE0 723 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 DHRS13Q6UX07 377 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 GBP6Q6ZN66 633 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 USP30Q70CQ3 517 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 BEND5Q7L4P6 421 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 TMPRSS7Q7RTY8 843 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 SLC47A2Q86VL8 602 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 CCDC117Q8IWD4 279 aaPredicted RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 ATP6V0D2Q8N8Y2 350 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 ZNF557Q8N988 423 aaPredicted RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 OR2T34Q8NGX1 318 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 OR14C36Q8NHC7 312 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 FRS2Q8WU20 508 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 SHC3Q92529 594 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 ALG14Q96F25 216 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 PPP1R13BQ96KQ4 1090 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 BTN2A3PQ96KV6 586 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 SLC2A13Q96QE2 648 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 CDC6Q99741 560 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 ACE2Q9BYF1 805 aaPredicted RBP6.39□□□□□ -1.39
NUP88-212ENST00000576708 SIK2Q9H0K1 926 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.39□□□□□ -1.39
NUP88-212ENST00000576708 GFOD1Q9NXC2 390 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 RWDD2AQ9UIY3 292 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 DNAJC12Q9UKB3 198 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 SARDHQ9UL12 918 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 VANGL2Q9ULK5 521 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 SLC5A6Q9Y289 635 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 CA5BQ9Y2D0 317 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 ZNF451Q9Y4E5 1061 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 HS3ST4Q9Y661 456 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 ITIH6Q6UXX5 1313 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 CHD6Q8TD26 2715 aa6.39□□□□□ -1.39
NUP88-212ENST00000576708 TBC1D3DA0A087WVF3 549 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 TBC1D3IA0A087WXS9 549 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 TBC1D3EA0A087X179 549 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 TBC1D3KA0A087X1G2 549 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 TBC1D3FA6NER0 549 aaPredicted RBP6.38□□□□□ -1.39
NUP88-212ENST00000576708 TRABD2BA6NFA1 517 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 LRRC72A6NJI9 287 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 TBC1D3LB9A6J9 549 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 K7ERQ8 282 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 M0QYT0 321 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 TNFSF14O43557 240 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 SNAP91O60641 907 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 GJB6O95452 261 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 PRAMEF1O95521 474 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 ADCY5O95622 1261 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 MT-CO1P00395 513 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 TBC1D3HP0C7X1 549 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 GOT1P17174 413 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 ABCB4P21439 1286 aa6.38□□□□□ -1.39
NUP88-212ENST00000576708 C5AR1P21730 350 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms