RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 RAB44Q7Z6P3 723 aaPredicted RBP13.96□□□□□ -0.17
NDE1-211ENST00000576502 PARGQ86W56 976 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 GATAD2AQ86YP4 633 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 GALNT15Q8N3T1 639 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 OR13H1Q8NG92 308 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 ATL2Q8NHH9 583 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 SLC35G2Q8TBE7 412 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 CNDP2Q96KP4 475 aaKnown RBP13.96□□□□□ -0.17
NDE1-211ENST00000576502 PACSIN1Q9BY11 444 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 SCUBE2Q9NQ36 999 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 ITM2BQ9Y287 266 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 CA5BQ9Y2D0 317 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 BTBD3Q9Y2F9 522 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 ATP8A1Q9Y2Q0 1164 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 MSRB2Q9Y3D2 182 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 PCDHGA1Q9Y5H4 931 aa13.96□□□□□ -0.17
NDE1-211ENST00000576502 TDRD6O60522 2096 aaKnown RBP13.95□□□□□ -0.18
NDE1-211ENST00000576502 ENC1O14682 589 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 RIOK3O14730 519 aaKnown RBP13.95□□□□□ -0.18
NDE1-211ENST00000576502 LZTS3O60299 673 aaPredicted RBP13.95□□□□□ -0.18
NDE1-211ENST00000576502 SOCS5O75159 536 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 MTA2O94776 668 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 CES1P23141 567 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 CYLC1P35663 651 aaPredicted RBP13.95□□□□□ -0.18
NDE1-211ENST00000576502 SLC1A1P43005 524 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 MMP13P45452 471 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 CLDN2P57739 230 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 YPEL5P62699 121 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 TBX2Q13207 712 aaPredicted RBP13.95□□□□□ -0.18
NDE1-211ENST00000576502 DPYSL3Q14195 570 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 SPA17Q15506 151 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 IFI16Q16666 785 aaKnown RBP13.95□□□□□ -0.18
NDE1-211ENST00000576502 ANKRD20A8PQ5CZ79 823 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 TXNRD3NBQ6F5E7 133 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 ARHGAP36Q6ZRI8 547 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 VSIG1Q86XK7 387 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 CAMK1DQ8IU85 385 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 NDUFAF2Q8N183 169 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 EID2Q8N6I1 236 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 NETO2Q8NC67 525 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.95□□□□□ -0.18
NDE1-211ENST00000576502 BTN2A2Q8WVV5 523 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 NUDCD1Q96RS6 583 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 CHP1Q99653 195 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 DUSP23Q9BVJ7 150 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 MAK16Q9BXY0 300 aaKnown RBP13.95□□□□□ -0.18
NDE1-211ENST00000576502 PCDH12Q9NPG4 1184 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 SPTLC3Q9NUV7 552 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 DNAJC28Q9NX36 388 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 KCTD5Q9NXV2 234 aa13.95□□□□□ -0.18
NDE1-211ENST00000576502 SPTY2D1-AS1A0A0U1RR47 76 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 GOLGA8CPA6NN73 597 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 ZNF487B1APH4 448 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 MAFKO60675 156 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 MMP20O60882 483 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 ATXN1LP0C7T5 689 aaKnown RBP13.94□□□□□ -0.18
NDE1-211ENST00000576502 CA4P22748 312 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 HTR1BP28222 390 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 GARSP41250 739 aaKnown RBP13.94□□□□□ -0.18
NDE1-211ENST00000576502 SLC10A7Q0GE19 358 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 ILKQ13418 452 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 PDE1CQ14123 709 aaPredicted RBP13.94□□□□□ -0.18
NDE1-211ENST00000576502 FGL2Q14314 439 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 LRRC14Q15048 493 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 PAFAH1B3Q15102 231 aaKnown RBP13.94□□□□□ -0.18
NDE1-211ENST00000576502 SHBQ15464 509 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 LRRC73Q5JTD7 316 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 UNQ6494/PRO21346Q6UXR6 183 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 CCDC170Q8IYT3 715 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 CHCHD4Q8N4Q1 142 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 MRFAP1L1Q96HT8 127 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 BMFQ96LC9 184 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 KLF6Q99612 283 aaPredicted RBP13.94□□□□□ -0.18
NDE1-211ENST00000576502 MGME1Q9BQP7 344 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 WRAP53Q9BUR4 548 aaKnown RBP13.94□□□□□ -0.18
NDE1-211ENST00000576502 ETNK2Q9NVF9 386 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 DDX56Q9NY93 547 aaKnown RBP13.94□□□□□ -0.18
NDE1-211ENST00000576502 AMACRQ9UHK6 382 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 GGT7Q9UJ14 662 aa13.94□□□□□ -0.18
NDE1-211ENST00000576502 GOLGA4Q13439 2230 aaKnown RBP13.94□□□□□ -0.18
NDE1-211ENST00000576502 CHD8Q9HCK8 2581 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 KNTC1P50748 2209 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 ARID1BQ8NFD5 2236 aaPredicted RBP13.93□□□□□ -0.18
NDE1-211ENST00000576502 LRRD1A4D1F6 860 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 POM121BA6NF01 834 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 RAD51BO15315 384 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 SPINT1O43278 529 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 SPOPO43791 374 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 BUB1BO60566 1050 aaPredicted RBP13.93□□□□□ -0.18
NDE1-211ENST00000576502 RFPL3O75679 317 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 PIAS2O75928 621 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 ELFN1P0C7U0 828 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 CYP2A6P11509 494 aaPredicted RBP13.93□□□□□ -0.18
NDE1-211ENST00000576502 C6P13671 934 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 NME1P15531 152 aaKnown RBP13.93□□□□□ -0.18
NDE1-211ENST00000576502 ZFXP17010 805 aaPredicted RBP13.93□□□□□ -0.18
NDE1-211ENST00000576502 MMP12P39900 470 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 MAGEA1P43355 309 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 PEX5P50542 639 aa13.93□□□□□ -0.18
NDE1-211ENST00000576502 BLKP51451 505 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms