RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CSNK1DP48730 415 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 NOVA1P51513 510 aaKnown RBP13.39□□□□□ -0.27
RPAIN-216ENST00000575599 RENBPP51606 427 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 HADHBP55084 474 aaKnown RBP13.39□□□□□ -0.27
RPAIN-216ENST00000575599 RPS21P63220 83 aaKnown RBP13.39□□□□□ -0.27
RPAIN-216ENST00000575599 GALNT2Q10471 571 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 STAT4Q14765 748 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 TMEM259Q4ZIN3 620 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 LRRC38Q5VT99 294 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 PSAPL1Q6NUJ1 521 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 RFX6Q8HWS3 928 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 DEFB124Q8NES8 71 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 LRRN4Q8WUT4 740 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 FEM1CQ96JP0 617 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 RNF157Q96PX1 679 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 TUBGCP5Q96RT8 1024 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 MAK16Q9BXY0 300 aaKnown RBP13.39□□□□□ -0.27
RPAIN-216ENST00000575599 SUV39H2Q9H5I1 410 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 ATP13A3Q9H7F0 1226 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 DDX56Q9NY93 547 aaKnown RBP13.39□□□□□ -0.27
RPAIN-216ENST00000575599 DKK3Q9UBP4 350 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 TRIM10Q9UDY6 481 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 SALL4Q9UJQ4 1053 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 ALG6Q9Y672 507 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 ANKRD36A6QL64 1941 aa13.39□□□□□ -0.27
RPAIN-216ENST00000575599 ASCC3Q8N3C0 2202 aaKnown RBP13.38□□□□□ -0.27
RPAIN-216ENST00000575599 A0A0U1RQJ8 604 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 A0A1W2PR77 199 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 C3orf70A6NLC5 250 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-216ENST00000575599 H0Y8X5 98 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 KIF2AO00139 706 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-216ENST00000575599 APOL1O14791 398 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 PSTPIP1O43586 416 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 TSPAN6O43657 245 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 KCNK5O95279 499 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 TUBB4AP04350 444 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 TIMP2P16035 220 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 ITIH2P19823 946 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 HNRNPA2B1P22626 353 aaKnown RBP13.38□□□□□ -0.27
RPAIN-216ENST00000575599 AKT2P31751 481 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 HSPA9P38646 679 aaKnown RBP13.38□□□□□ -0.27
RPAIN-216ENST00000575599 CTSKP43235 329 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 MAXP61244 160 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 GNG11P61952 73 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 AP1S1P61966 158 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 DYNLT1P63172 113 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 IL9RQ01113 521 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 BCL2L1Q07817 233 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 NSUN2Q08J23 767 aaKnown RBP eCLIP13.38□□□□□ -0.27
RPAIN-216ENST00000575599 DNTTIP2Q5QJE6 756 aaKnown RBP13.38□□□□□ -0.27
RPAIN-216ENST00000575599 MARC1Q5VT66 337 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 TIGD7Q6NT04 549 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-216ENST00000575599 C11orf63Q6NUN7 778 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 DAAM2Q86T65 1068 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 LRRC49Q8IUZ0 686 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 PGBD5Q8N414 524 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 TPCN2Q8NHX9 752 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 CXorf40AQ8TE69 158 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 ZNF641Q96N77 438 aaPredicted RBP13.38□□□□□ -0.27
RPAIN-216ENST00000575599 WRAP53Q9BUR4 548 aaKnown RBP13.38□□□□□ -0.27
RPAIN-216ENST00000575599 SLC17A9Q9BYT1 436 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 NT5MQ9NPB1 228 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 GDF3Q9NR23 364 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 TM7SF3Q9NS93 570 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 TTLL3Q9Y4R7 772 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 HEY1Q9Y5J3 304 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 DUSP10Q9Y6W6 482 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 TRPM6Q9BX84 2022 aa13.38□□□□□ -0.27
RPAIN-216ENST00000575599 MED19A0JLT2 244 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-216ENST00000575599 TSPAN11A1L157 253 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 IGLON5A6NGN9 336 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 UPK3BL1B0FP48 263 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 ZNF487B1APH4 448 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 UPK3BL2E5RIL1 263 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 TLR4O00206 839 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 GIPC1O14908 333 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 AREL1O15033 823 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 NEBLO76041 1014 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 PAK4O96013 591 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-216ENST00000575599 PRKCGP05129 697 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 CD59P13987 128 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 MX2P20592 715 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 MARCKSL1P49006 195 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 CLDN2P57739 230 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 SEMG2Q02383 582 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 ITKQ08881 620 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 SLC10A2Q12908 348 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-216ENST00000575599 SGCGQ13326 291 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 FGL2Q14314 439 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 LLGL1Q15334 1064 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 UGP2Q16851 508 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 ZNF569Q5MCW4 686 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 PRAMEF14Q5SWL7 426 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 BRAT1Q6PJG6 821 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 MFSD7Q6UXD7 560 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 ZSWIM9Q86XI8 627 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 SYCE1Q8N0S2 351 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPAIN-216ENST00000575599 PLD5Q8N7P1 536 aa13.37□□□□□ -0.27
RPAIN-216ENST00000575599 MFSD2AQ8NA29 543 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms