RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-231ENST00000574875 IL10RBQ08334 325 aa19.68■□□□□ 0.74
ABR-231ENST00000574875 ST3GAL2Q16842 350 aa19.68■□□□□ 0.74
ABR-231ENST00000574875 ASTE1Q2TB18 679 aaPredicted RBP19.68■□□□□ 0.74
ABR-231ENST00000574875 TXNRD3NBQ6F5E7 133 aa19.68■□□□□ 0.74
ABR-231ENST00000574875 UNQ6494/PRO21346Q6UXR6 183 aa19.68■□□□□ 0.74
ABR-231ENST00000574875 ARHGAP36Q6ZRI8 547 aa19.68■□□□□ 0.74
ABR-231ENST00000574875 SRLQ86TD4 932 aa19.68■□□□□ 0.74
ABR-231ENST00000574875 DCP2Q8IU60 420 aaKnown RBP19.68■□□□□ 0.74
ABR-231ENST00000574875 ZNF592Q92610 1267 aa19.68■□□□□ 0.74
ABR-231ENST00000574875 CALN1Q9BXU9 219 aa19.68■□□□□ 0.74
ABR-231ENST00000574875 SUV39H2Q9H5I1 410 aa19.68■□□□□ 0.74
ABR-231ENST00000574875 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.68■□□□□ 0.74
ABR-231ENST00000574875 IPO11Q9UI26 975 aaKnown RBP19.68■□□□□ 0.74
ABR-231ENST00000574875 CHD8Q9HCK8 2581 aa19.68■□□□□ 0.74
ABR-231ENST00000574875 TDRD6O60522 2096 aaKnown RBP19.67■□□□□ 0.74
ABR-231ENST00000574875 POM121BA6NF01 834 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 RAD51BO15315 384 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 SPINT1O43278 529 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 DKK1O94907 266 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 PIGNO95427 931 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 H2AFZP0C0S5 128 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 ITIH2P19823 946 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 XPAP23025 273 aaPredicted RBP19.67■□□□□ 0.74
ABR-231ENST00000574875 SSR1P43307 286 aaKnown RBP19.67■□□□□ 0.74
ABR-231ENST00000574875 RFTN1Q14699 578 aaPredicted RBP19.67■□□□□ 0.74
ABR-231ENST00000574875 SLC18A3Q16572 532 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 HADHQ16836 314 aaKnown RBP19.67■□□□□ 0.74
ABR-231ENST00000574875 LRRC73Q5JTD7 316 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 TMCO3Q6UWJ1 677 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 H2AFVQ71UI9 128 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 KANSL1Q7Z3B3 1105 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 TP53INP2Q8IXH6 220 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 TSEN2Q8NCE0 465 aaKnown RBP19.67■□□□□ 0.74
ABR-231ENST00000574875 ZNF564Q8TBZ8 553 aaPredicted RBP19.67■□□□□ 0.74
ABR-231ENST00000574875 GATA6Q92908 595 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 CNDP2Q96KP4 475 aaKnown RBP19.67■□□□□ 0.74
ABR-231ENST00000574875 ZNF641Q96N77 438 aaPredicted RBP19.67■□□□□ 0.74
ABR-231ENST00000574875 CSPG4P5Q96PW8 444 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 KLF6Q99612 283 aaPredicted RBP19.67■□□□□ 0.74
ABR-231ENST00000574875 LZTFL1Q9NQ48 299 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 CTTNBP2NLQ9P2B4 639 aa19.67■□□□□ 0.74
ABR-231ENST00000574875 ENC1O14682 589 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 FPGTO14772 594 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 BUB1BO60566 1050 aaPredicted RBP19.66■□□□□ 0.74
ABR-231ENST00000574875 MMP20O60882 483 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 CASQ1P31415 396 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 ARHGAP25P42331 645 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 SUOXP51687 545 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 SLC25A11Q02978 314 aaKnown RBP19.66■□□□□ 0.74
ABR-231ENST00000574875 NSUN2Q08J23 767 aaKnown RBP eCLIP19.66■□□□□ 0.74
ABR-231ENST00000574875 KIF5AQ12840 1032 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 CCDC157Q569K6 752 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 PTAR1Q7Z6K3 402 aaPredicted RBP19.66■□□□□ 0.74
ABR-231ENST00000574875 CXorf40AQ8TE69 158 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 TUBGCP5Q96RT8 1024 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 CINPQ9BW66 212 aaPredicted RBP19.66■□□□□ 0.74
ABR-231ENST00000574875 TMEM121BQ9BXQ6 578 aaPredicted RBP19.66■□□□□ 0.74
ABR-231ENST00000574875 PCDH18Q9HCL0 1135 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 ETNK2Q9NVF9 386 aa19.66■□□□□ 0.74
ABR-231ENST00000574875 SDC3O75056 442 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 TM7SF2O76062 418 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 RABIFP47224 123 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 RGRP47804 291 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 KRT81Q14533 505 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 UGP2Q16851 508 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 TMEM52BQ4KMG9 183 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 CFAP58Q5T655 872 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 KYAT3Q6YP21 454 aaKnown RBP19.65■□□□□ 0.74
ABR-231ENST00000574875 CAMK1DQ8IU85 385 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 SLC22A18ASQ8N1D0 253 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 SLC25A45Q8N413 288 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 MYRIPQ8NFW9 859 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 CTNNBL1Q8WYA6 563 aaPredicted RBP19.65■□□□□ 0.74
ABR-231ENST00000574875 CENPTQ96BT3 561 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 IFT43Q96FT9 208 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 ZNF599Q96NL3 588 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 UVRAGQ9P2Y5 699 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 PCDHA13Q9Y5I0 950 aa19.65■□□□□ 0.74
ABR-231ENST00000574875 ARID1BQ8NFD5 2236 aaPredicted RBP19.65■□□□□ 0.74
ABR-231ENST00000574875 MAP1BP46821 2468 aaKnown RBP19.65■□□□□ 0.74
ABR-231ENST00000574875 TSPAN11A1L157 253 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 PJA2O43164 708 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 IL4RP24394 825 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 MAGEA1P43355 309 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 RENBPP51606 427 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 CDH6P55285 790 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 ELP6Q0PNE2 266 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 TUBB2AQ13885 445 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 LBRQ14739 615 aaKnown RBP19.64■□□□□ 0.73
ABR-231ENST00000574875 BRAT1Q6PJG6 821 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 CCNI2Q6ZMN8 369 aaPredicted RBP19.64■□□□□ 0.73
ABR-231ENST00000574875 TMPRSS7Q7RTY8 843 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 DENND6BQ8NEG7 585 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 TSC1Q92574 1164 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 WRAP53Q9BUR4 548 aaKnown RBP19.64■□□□□ 0.73
ABR-231ENST00000574875 TUBB2BQ9BVA1 445 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 PACSIN1Q9BY11 444 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 ATP13A3Q9H7F0 1226 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 SEPT3Q9UH03 358 aa19.64■□□□□ 0.73
ABR-231ENST00000574875 COL5A1P20908 1838 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms