RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 DNAJC28Q9NX36 388 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 TAS2R1Q9NYW7 299 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 A0A087X1B8 175 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 PRR5-ARHGAP8B1AHC4 643 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 H3BNC9 293 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 SLC7A4O43246 635 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 LDB2O43679 373 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 FGF1P05230 155 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 GLDCP23378 1020 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 LEPRP48357 1165 aaKnown RBP14.15□□□□□ -0.14
VPS33B-208ENST00000574755 IDH3AP50213 366 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
VPS33B-208ENST00000574755 SGSHP51688 502 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 ARHGAP8P85298 464 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 TUBB3Q13509 450 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 UBAP2LQ14157 1087 aaKnown RBP14.15□□□□□ -0.14
VPS33B-208ENST00000574755 TSNAXIP1Q2TAA8 658 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 VWA5B1Q5TIE3 1220 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.15□□□□□ -0.14
VPS33B-208ENST00000574755 UBA2Q9UBT2 640 aaPredicted RBP14.15□□□□□ -0.14
VPS33B-208ENST00000574755 SEPT3Q9UH03 358 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 TBX21Q9UL17 535 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 KCTD3Q9Y597 815 aa14.15□□□□□ -0.14
VPS33B-208ENST00000574755 ANAPC1Q9H1A4 1944 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 GSC2O15499 205 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 TSPAN3O60637 253 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 DIAPH2O60879 1101 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 RHOCP08134 193 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 ALOX15P16050 662 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 GRIA4P48058 902 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 ARSDP51689 593 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 KDSRQ06136 332 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 DLG1Q12959 904 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 ZNF177Q13360 481 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 ADGRF1Q5T601 910 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 SLC39A11Q8N1S5 342 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 TEX9Q8N6V9 391 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 PNPLA1Q8N8W4 532 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 MOCOSQ96EN8 888 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 TRMT2BQ96GJ1 504 aaKnown RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 MGME1Q9BQP7 344 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 CDH19Q9H159 772 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 MFSD1Q9H3U5 465 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 AGO1Q9UL18 857 aaKnown RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 SORCS3Q9UPU3 1222 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 L3MBTL1Q9Y468 752 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 ARL5AQ9Y689 179 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 A0A1B0GVM2 712 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 TCAF2A6NFQ2 919 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 OR51F1A6NGY5 319 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 ZNF195O14628 629 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 EPOP01588 193 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 URODP06132 367 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 CCND1P24385 295 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 ELF1P32519 619 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 CLCN5P51795 746 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 KPNA2P52292 529 aaKnown RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 NAGLUP54802 743 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 TWF1Q12792 350 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 BTG3Q14201 252 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 ALG1LQ6GMV1 187 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 LDB1Q86U70 411 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 TDRD5Q8NAT2 981 aaKnown RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 DIS3LQ8TF46 1054 aaKnown RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 VWCEQ96DN2 955 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 EXOC2Q96KP1 924 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 GPR78Q96P69 363 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 PSKH2Q96QS6 385 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 OLFM1Q99784 485 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 ILKAPQ9H0C8 392 aaPredicted RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 MRPL46Q9H2W6 279 aaKnown RBP14.14□□□□□ -0.15
VPS33B-208ENST00000574755 COG4Q9H9E3 785 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 ACSS2Q9NR19 701 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 SMPD4Q9NXE4 827 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 TAGLN3Q9UI15 199 aa14.14□□□□□ -0.15
VPS33B-208ENST00000574755 B2RBV5 119 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 TARM1B6A8C7 271 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 CBX4O00257 560 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 BUD23O43709 281 aaKnown RBP14.13□□□□□ -0.15
VPS33B-208ENST00000574755 KDELR3O43731 214 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 WFS1O76024 890 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 CHRNGP07510 517 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 PIRTP0C851 137 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 SCNN1BP51168 640 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 PRKAA2P54646 552 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 DEFB103AP81534 67 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 LAMB3Q13751 1172 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 CSHL1Q14406 222 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 ICE2Q659A1 982 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 C16orf59Q7L2K0 433 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 TTC8Q8TAM2 541 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 AUTS2Q8WXX7 1259 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 ZNF689Q96CS4 500 aaPredicted RBP14.13□□□□□ -0.15
VPS33B-208ENST00000574755 TBATAQ96M53 351 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 DRC3Q9H069 523 aa14.13□□□□□ -0.15
VPS33B-208ENST00000574755 ILVBLA1L0T0 632 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 CHST9Q7L1S5 443 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 SETD3Q86TU7 594 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-208ENST00000574755 RNF135Q8IUD6 432 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms