RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 ZSWIM9Q86XI8 627 aa33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 PDCD6IPQ8WUM4 868 aaKnown RBP33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 IMP4Q96G21 291 aaKnown RBP33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 ZBTB32Q9Y2Y4 487 aaPredicted RBP33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 RAI2Q9Y5P3 530 aa33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 FADS3Q9Y5Q0 445 aa33.39■■■□□ 2.94
CTDNEP1-209ENST00000574205 C10orf142B7Z368 130 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 TCP1P17987 556 aaKnown RBP33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 CA4P22748 312 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 XPAP23025 273 aaPredicted RBP33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 CD86P42081 329 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 IHHQ14623 411 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 TPX2Q9ULW0 747 aaKnown RBP33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 CFAP69A5D8W1 941 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 PRR23AA6NEV1 266 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 MEI4A8MW99 385 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 UPK3BL1B0FP48 263 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 UPK3BL2E5RIL1 263 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 MMP2P08253 660 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 CD68P34810 354 aaPredicted RBP33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 SYCP2LQ5T4T6 812 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 ARMC12Q5T9G4 340 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 COG1Q8WTW3 980 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 C1orf54Q8WWF1 131 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 BIRC7Q96CA5 298 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 NAP1L3Q99457 506 aaPredicted RBP33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 TDRD1Q9BXT4 1180 aaKnown RBP33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 PCDHB9Q9Y5E1 797 aa33.38■■■□□ 2.93
CTDNEP1-209ENST00000574205 CTAGE9A4FU28 777 aa33.37■■■□□ 2.93
CTDNEP1-209ENST00000574205 AREL1O15033 823 aa33.37■■■□□ 2.93
CTDNEP1-209ENST00000574205 PRLRP16471 622 aa33.37■■■□□ 2.93
CTDNEP1-209ENST00000574205 SKOR1P84550 965 aa33.37■■■□□ 2.93
CTDNEP1-209ENST00000574205 OASLQ15646 514 aaKnown RBP33.37■■■□□ 2.93
CTDNEP1-209ENST00000574205 CCNG2Q16589 344 aa33.37■■■□□ 2.93
CTDNEP1-209ENST00000574205 PAPD7Q5XG87 772 aaKnown RBP33.37■■■□□ 2.93
CTDNEP1-209ENST00000574205 MS4A14Q96JA4 679 aa33.37■■■□□ 2.93
CTDNEP1-209ENST00000574205 TMEM121Q9BTD3 319 aa33.37■■■□□ 2.93
CTDNEP1-209ENST00000574205 TSPAN6O43657 245 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 FSBPO95073 299 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 EPN2O95208 641 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 PGLSO95336 258 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 IGHV4-34P06331 123 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 NFKB1P19838 968 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 CCR5P51681 352 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 ELP6Q0PNE2 266 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 SLC14A2Q15849 920 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 LRRC73Q5JTD7 316 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 WDR45BQ5MNZ6 344 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 PRPF39Q86UA1 669 aaKnown RBP33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 TRIM69Q86WT6 500 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 RBM15Q96T37 977 aaKnown RBP eCLIP33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 GMEB2Q9UKD1 530 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 PCDHGA5Q9Y5G8 931 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 OTOGLQ3ZCN5 2332 aa33.36■■■□□ 2.93
CTDNEP1-209ENST00000574205 NEMP1O14524 444 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 FZD6O60353 706 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 PCDH8O95206 1070 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 RETP07949 1114 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 STIP1P31948 543 aaKnown RBP33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 PPP2CBP62714 309 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 PPP2CAP67775 309 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 ANKRD20A2Q5SQ80 823 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 ANKRD20A1Q5TYW2 823 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 ANKRD20A3Q5VUR7 823 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 ITPRIPL1Q6GPH6 555 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 CYP2U1Q7Z449 544 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 ACTRT1Q8TDG2 376 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 DNASE2BQ8WZ79 361 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 TADA1Q96BN2 335 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 SPATA13Q96N96 652 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 HOMER3Q9NSC5 361 aa33.35■■■□□ 2.93
CTDNEP1-209ENST00000574205 TRPM6Q9BX84 2022 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 PGRMC1O00264 195 aaKnown RBP33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 SPINT1O43278 529 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 CPP00450 1065 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 ITPKAP23677 461 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 DPP6P42658 865 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 ETF1P62495 437 aaKnown RBP33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 CREB5Q02930 508 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 ERAP2Q6P179 960 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 DRICH1Q6PGQ1 229 aaPredicted RBP33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 FAM71DQ8N9W8 422 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 FCRL5Q96RD9 977 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 PCDH12Q9NPG4 1184 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 EIF2AK3Q9NZJ5 1116 aaKnown RBP33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 RSPH14Q9UHP6 348 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 PHTF1Q9UMS5 762 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 ZNF148Q9UQR1 794 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 ITM2BQ9Y287 266 aa33.34■■■□□ 2.93
CTDNEP1-209ENST00000574205 C5orf60A6NFR6 353 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 RIOK3O14730 519 aaKnown RBP33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 LATO43561 262 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 OPHN1O60890 802 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 KIAA1161Q6NSJ0 714 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 RGL4Q8IZJ4 473 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 SPATA22Q8NHS9 363 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 SNX19Q92543 992 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 FEM1CQ96JP0 617 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 GBA3Q9H227 469 aa33.33■■■□□ 2.93
CTDNEP1-209ENST00000574205 GGT7Q9UJ14 662 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms