RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 ANKRD36A6QL64 1941 aa22.23■■□□□ 1.15
SNF8-216ENST00000573795 COL6A6A6NMZ7 2263 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 WASH4PA8MWX3 477 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 CDRT15L2A8MXV6 281 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 RASA4BC9J798 803 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 RASA4O43374 803 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 PIGNO95427 931 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 EPHB2P29323 1055 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 NSFP46459 744 aaKnown RBP22.22■■□□□ 1.15
SNF8-216ENST00000573795 CFHR1Q03591 330 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 SERINC3Q13530 473 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 CYTH1Q15438 398 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 TMEM52BQ4KMG9 183 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 MON1BQ7L1V2 547 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 SNRNP27Q8WVK2 155 aaKnown RBP22.22■■□□□ 1.15
SNF8-216ENST00000573795 CCDC3Q9BQI4 270 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 SELENOOQ9BVL4 669 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 SLC13A1Q9BZW2 595 aa22.22■■□□□ 1.15
SNF8-216ENST00000573795 TSPAN11A1L157 253 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 SIGLEC16A6NMB1 481 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 TOR1BO14657 336 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 ANXA6P08133 673 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 STAT1P42224 750 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 YBEYP58557 167 aaPredicted RBP22.21■■□□□ 1.15
SNF8-216ENST00000573795 RHDQ02161 417 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 RAD51Q06609 339 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 WSCD2Q2TBF2 565 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 FAXCQ5TGI0 409 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 ZNF354CQ86Y25 554 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 NAT6Q93015 286 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.21■■□□□ 1.15
SNF8-216ENST00000573795 C1QTNF7Q9BXJ2 289 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 CPEB1Q9BZB8 566 aaKnown RBP22.21■■□□□ 1.15
SNF8-216ENST00000573795 PDFQ9HBH1 243 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 RABGEF1Q9UJ41 708 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 FZD10Q9ULW2 581 aa22.21■■□□□ 1.15
SNF8-216ENST00000573795 NTN3O00634 580 aaPredicted RBP22.2■■□□□ 1.14
SNF8-216ENST00000573795 CALB1P05937 261 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 RPIAP49247 311 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 ZNF143P52747 638 aaPredicted RBP22.2■■□□□ 1.14
SNF8-216ENST00000573795 RPL7AP62424 266 aaKnown RBP22.2■■□□□ 1.14
SNF8-216ENST00000573795 PPARDQ03181 441 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 ALG11Q2TAA5 492 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 EFHC2Q5JST6 749 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 PPP1R15BQ5SWA1 713 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 KCTD16Q68DU8 428 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 ZSWIM9Q86XI8 627 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 UMODL1-AS1Q8N2C9 162 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 KYQ8NBH2 561 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 TTC9Q92623 222 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 GLMNQ92990 594 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 SEMA4CQ9C0C4 833 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 PADI4Q9UM07 663 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 DAAM1Q9Y4D1 1078 aa22.2■■□□□ 1.14
SNF8-216ENST00000573795 CREB3O43889 395 aa22.19■■□□□ 1.14
SNF8-216ENST00000573795 C6P13671 934 aa22.19■■□□□ 1.14
SNF8-216ENST00000573795 RBMS1P29558 406 aaKnown RBP22.19■■□□□ 1.14
SNF8-216ENST00000573795 HK3P52790 923 aa22.19■■□□□ 1.14
SNF8-216ENST00000573795 SYCP1Q15431 976 aa22.19■■□□□ 1.14
SNF8-216ENST00000573795 PARP15Q460N3 678 aa22.19■■□□□ 1.14
SNF8-216ENST00000573795 SCYL2Q6P3W7 929 aa22.19■■□□□ 1.14
SNF8-216ENST00000573795 CLEC14AQ86T13 490 aa22.19■■□□□ 1.14
SNF8-216ENST00000573795 PCDH19Q8TAB3 1148 aa22.19■■□□□ 1.14
SNF8-216ENST00000573795 TSACCQ96A04 125 aaPredicted RBP22.19■■□□□ 1.14
SNF8-216ENST00000573795 WBP1Q96G27 269 aa22.19■■□□□ 1.14
SNF8-216ENST00000573795 LRRC19Q9H756 370 aa22.19■■□□□ 1.14
SNF8-216ENST00000573795 PCDH12Q9NPG4 1184 aa22.19■■□□□ 1.14
SNF8-216ENST00000573795 SCN8AQ9UQD0 1980 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 PEX5P50542 639 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 SUOXP51687 545 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 COPB1P53618 953 aaKnown RBP22.18■■□□□ 1.14
SNF8-216ENST00000573795 OGDHQ02218 1023 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 VAC14Q08AM6 782 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 ELP6Q0PNE2 266 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 LRRC14Q15048 493 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 TCEA2Q15560 299 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 UGP2Q16851 508 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 TAF1BQ53T94 588 aaPredicted RBP22.18■■□□□ 1.14
SNF8-216ENST00000573795 FKBP15Q5T1M5 1219 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 B3GNT8Q7Z7M8 397 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 ZNF605Q86T29 641 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 FSTL5Q8N475 847 aaPredicted RBP22.18■■□□□ 1.14
SNF8-216ENST00000573795 ARL10Q8N8L6 244 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 WDR36Q8NI36 951 aaKnown RBP22.18■■□□□ 1.14
SNF8-216ENST00000573795 WDR48Q8TAF3 677 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 MCEEQ96PE7 176 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 EDEM3Q9BZQ6 932 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 FANCLQ9NW38 375 aa22.18■■□□□ 1.14
SNF8-216ENST00000573795 PIEZO2Q9H5I5 2752 aa22.17■■□□□ 1.14
SNF8-216ENST00000573795 CCDC187A0A096LP49 1063 aa22.17■■□□□ 1.14
SNF8-216ENST00000573795 J3KR12 359 aa22.17■■□□□ 1.14
SNF8-216ENST00000573795 BUB1BO60566 1050 aaPredicted RBP22.17■■□□□ 1.14
SNF8-216ENST00000573795 MMP12P39900 470 aa22.17■■□□□ 1.14
SNF8-216ENST00000573795 RGRP47804 291 aa22.17■■□□□ 1.14
SNF8-216ENST00000573795 SPIDRQ14159 915 aa22.17■■□□□ 1.14
SNF8-216ENST00000573795 NFATC4Q14934 902 aa22.17■■□□□ 1.14
SNF8-216ENST00000573795 AGERQ15109 404 aa22.17■■□□□ 1.14
SNF8-216ENST00000573795 ESRP1Q6NXG1 681 aaKnown RBP22.17■■□□□ 1.14
SNF8-216ENST00000573795 DNAJC24Q6P3W2 148 aa22.17■■□□□ 1.14
SNF8-216ENST00000573795 FOXR1Q6PIV2 292 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms