RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 ITGA2BP08514 1039 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 PABPC1P11940 636 aaKnown RBP12.97□□□□□ -0.33
PRPF8-207ENST00000573681 PSMA3P25788 255 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 HLA-FP30511 346 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 RPA3P35244 121 aaPredicted RBP12.97□□□□□ -0.33
PRPF8-207ENST00000573681 CCNFP41002 786 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 NUMBP49757 651 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 ACVR1Q04771 509 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 DHCR24Q15392 516 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 FAM78AQ5JUQ0 283 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 ATAT1Q5SQI0 421 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 NPAS3Q8IXF0 933 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 PLPP6Q8IY26 295 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 AHI1Q8N157 1196 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 RIN3Q8TB24 985 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 MGARPQ8TDB4 240 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 SCG3Q8WXD2 468 aaKnown RBP12.97□□□□□ -0.33
PRPF8-207ENST00000573681 FGF13Q92913 245 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 PTPRN2Q92932 1015 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 ATP2A3Q93084 1043 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 CHMP6Q96FZ7 201 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 APOPT1Q96IL0 206 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 CABS1Q96KC9 395 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 MAGEB18Q96M61 343 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 ASB16Q96NS5 453 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 AGAP2Q99490 1192 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 IQCGQ9H095 443 aaKnown RBP12.97□□□□□ -0.33
PRPF8-207ENST00000573681 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.97□□□□□ -0.33
PRPF8-207ENST00000573681 HACD3Q9P035 362 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 DCDC2Q9UHG0 476 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 GGA2Q9UJY4 613 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 FCF1Q9Y324 198 aaKnown RBP12.97□□□□□ -0.33
PRPF8-207ENST00000573681 PCDHGC4Q9Y5F7 938 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 WNT6Q9Y6F9 365 aa12.97□□□□□ -0.33
PRPF8-207ENST00000573681 A0A1W2PQ67 120 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 GOLGA8RI6L899 631 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 K7ERQ8 282 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 HOXC11O43248 304 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-207ENST00000573681 FZD6O60353 706 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 GJB3O75712 270 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 NFATC1O95644 943 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 GSRP00390 522 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 POLR2EP19388 210 aaKnown RBP12.96□□□□□ -0.33
PRPF8-207ENST00000573681 VASPP50552 380 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-207ENST00000573681 LIMK2P53671 638 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 WDR4P57081 412 aaKnown RBP12.96□□□□□ -0.33
PRPF8-207ENST00000573681 ECT2LQ008S8 904 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 RAD51Q06609 339 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 BCL2L1Q07817 233 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 HYAL1Q12794 435 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 ADAM15Q13444 863 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 GALNT3Q14435 633 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 GRM3Q14832 879 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 PDGFRLQ15198 375 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 TAF1AQ15573 450 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-207ENST00000573681 INSCQ1MX18 579 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 MYLK3Q32MK0 819 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 ARMC12Q5T9G4 340 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 ASTLQ6HA08 431 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-207ENST00000573681 GALNT7Q86SF2 657 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 TAX1BP1Q86VP1 789 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 PCDH20Q8N6Y1 951 aaKnown RBP12.96□□□□□ -0.33
PRPF8-207ENST00000573681 BCAS4Q8TDM0 211 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 TCP10LQ8TDR4 215 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 WFIKKN2Q8TEU8 576 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 ISL2Q96A47 359 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 EXOC2Q96KP1 924 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 LRRC3BQ96PB8 259 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 TUBGCP5Q96RT8 1024 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 CCT8L2Q96SF2 557 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 KLF6Q99612 283 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-207ENST00000573681 MCMBPQ9BTE3 642 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 VPS11Q9H270 941 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 MFSD1Q9H3U5 465 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 RHOJQ9H4E5 214 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 SLC2A6Q9UGQ3 507 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 GRID1Q9ULK0 1009 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 PSAT1Q9Y617 370 aa12.96□□□□□ -0.33
PRPF8-207ENST00000573681 SMAD6O43541 496 aaKnown RBP12.95□□□□□ -0.34
PRPF8-207ENST00000573681 SOCS5O75159 536 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 RPP40O75818 363 aaKnown RBP12.95□□□□□ -0.34
PRPF8-207ENST00000573681 POP4O95707 220 aaKnown RBP12.95□□□□□ -0.34
PRPF8-207ENST00000573681 FAM107AO95990 144 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 AHSGP02765 367 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 ASLP04424 464 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 SRCP12931 536 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 TYK2P29597 1187 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 NNMTP40261 264 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 VIPR2P41587 438 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 GRIA4P48058 902 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 SERPINB8P50452 374 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 NEK3P51956 506 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 PRAMEP78395 509 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 PPARDQ03181 441 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 TRAF2Q12933 501 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 BMPR2Q13873 1038 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 LRRC14Q15048 493 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 QPCTQ16769 361 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 EML3Q32P44 896 aa12.95□□□□□ -0.34
PRPF8-207ENST00000573681 CARD16Q5EG05 197 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms