RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 WNT1P04628 370 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 PROS1P07225 676 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 ZNF883P0CG24 379 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 SRCP12931 536 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 GLDCP23378 1020 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 MAT2AP31153 395 aaKnown RBP12.01□□□□□ -0.49
NDE1-206ENST00000572967 CTSKP43235 329 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 ATP5OP48047 213 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 EIF3EP60228 445 aaKnown RBP12.01□□□□□ -0.49
NDE1-206ENST00000572967 RACK1P63244 317 aaKnown RBP12.01□□□□□ -0.49
NDE1-206ENST00000572967 OTUD4Q01804 1114 aaKnown RBP12.01□□□□□ -0.49
NDE1-206ENST00000572967 SFSWAPQ12872 951 aaKnown RBP12.01□□□□□ -0.49
NDE1-206ENST00000572967 HNRNPDQ14103 355 aaKnown RBP12.01□□□□□ -0.49
NDE1-206ENST00000572967 DLG2Q15700 870 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 ZNF423Q2M1K9 1284 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 AGBL4Q5VU57 503 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 AFMIDQ63HM1 303 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 C22orf39Q6P5X5 142 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.01□□□□□ -0.49
NDE1-206ENST00000572967 DSG4Q86SJ6 1040 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 ATP11CQ8NB49 1132 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 CCNYQ8ND76 341 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 OR7D4Q8NG98 312 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 BAHD1Q8TBE0 780 aaPredicted RBP12.01□□□□□ -0.49
NDE1-206ENST00000572967 PIP4K2CQ8TBX8 421 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 ACTL9Q8TC94 416 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 GRIN3AQ8TCU5 1115 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 CCHCR1Q8TD31 782 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 CASKIN2Q8WXE0 1202 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 FATE1Q969F0 183 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 HDAC11Q96DB2 347 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 SERAC1Q96JX3 654 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 ZNF599Q96NL3 588 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 PPP1R2P1Q96PQ5 205 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 QKIQ96PU8 341 aaKnown RBP eCLIP12.01□□□□□ -0.49
NDE1-206ENST00000572967 DTLQ9NZJ0 730 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 ZMIZ1Q9ULJ6 1067 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 NEUROG3Q9Y4Z2 214 aa12.01□□□□□ -0.49
NDE1-206ENST00000572967 TBC1D3DA0A087WVF3 549 aa12□□□□□ -0.49
NDE1-206ENST00000572967 TBC1D3IA0A087WXS9 549 aa12□□□□□ -0.49
NDE1-206ENST00000572967 TBC1D3EA0A087X179 549 aa12□□□□□ -0.49
NDE1-206ENST00000572967 TBC1D3KA0A087X1G2 549 aa12□□□□□ -0.49
NDE1-206ENST00000572967 TBC1D3FA6NER0 549 aaPredicted RBP12□□□□□ -0.49
NDE1-206ENST00000572967 TBC1D3LB9A6J9 549 aa12□□□□□ -0.49
NDE1-206ENST00000572967 WNT9AO14904 365 aa12□□□□□ -0.49
NDE1-206ENST00000572967 ZNF185O15231 689 aa12□□□□□ -0.49
NDE1-206ENST00000572967 FANCGO15287 622 aa12□□□□□ -0.49
NDE1-206ENST00000572967 PLRG1O43660 514 aaKnown RBP12□□□□□ -0.49
NDE1-206ENST00000572967 PHF2O75151 1096 aa12□□□□□ -0.49
NDE1-206ENST00000572967 MT-CO1P00395 513 aa12□□□□□ -0.49
NDE1-206ENST00000572967 CTSLP07711 333 aa12□□□□□ -0.49
NDE1-206ENST00000572967 TBC1D3HP0C7X1 549 aa12□□□□□ -0.49
NDE1-206ENST00000572967 RBP3P10745 1247 aa12□□□□□ -0.49
NDE1-206ENST00000572967 STIP1P31948 543 aaKnown RBP12□□□□□ -0.49
NDE1-206ENST00000572967 GARSP41250 739 aaKnown RBP12□□□□□ -0.49
NDE1-206ENST00000572967 GBE1Q04446 702 aa12□□□□□ -0.49
NDE1-206ENST00000572967 SLC20A2Q08357 652 aa12□□□□□ -0.49
NDE1-206ENST00000572967 CNTN1Q12860 1018 aa12□□□□□ -0.49
NDE1-206ENST00000572967 RFTN1Q14699 578 aaPredicted RBP12□□□□□ -0.49
NDE1-206ENST00000572967 LLGL1Q15334 1064 aa12□□□□□ -0.49
NDE1-206ENST00000572967 CCDC157Q569K6 752 aa12□□□□□ -0.49
NDE1-206ENST00000572967 SLC45A4Q5BKX6 768 aa12□□□□□ -0.49
NDE1-206ENST00000572967 TBC1D3GQ6DHY5 549 aa12□□□□□ -0.49
NDE1-206ENST00000572967 TBC1D3CQ6IPX1 549 aa12□□□□□ -0.49
NDE1-206ENST00000572967 AADACL2Q6P093 401 aa12□□□□□ -0.49
NDE1-206ENST00000572967 DARS2Q6PI48 645 aaKnown RBP12□□□□□ -0.49
NDE1-206ENST00000572967 ZNF572Q7Z3I7 529 aaPredicted RBP12□□□□□ -0.49
NDE1-206ENST00000572967 RAB44Q7Z6P3 723 aaPredicted RBP12□□□□□ -0.49
NDE1-206ENST00000572967 GATAD2AQ86YP4 633 aa12□□□□□ -0.49
NDE1-206ENST00000572967 TBC1D3Q8IZP1 549 aaPredicted RBP12□□□□□ -0.49
NDE1-206ENST00000572967 NPWQ8N729 165 aa12□□□□□ -0.49
NDE1-206ENST00000572967 MAGOHBQ96A72 148 aaKnown RBP12□□□□□ -0.49
NDE1-206ENST00000572967 CELF6Q96J87 481 aaKnown RBP12□□□□□ -0.49
NDE1-206ENST00000572967 MS4A14Q96JA4 679 aa12□□□□□ -0.49
NDE1-206ENST00000572967 OLFM3Q96PB7 478 aa12□□□□□ -0.49
NDE1-206ENST00000572967 TSGA13Q96PP4 275 aa12□□□□□ -0.49
NDE1-206ENST00000572967 VAT1Q99536 393 aa12□□□□□ -0.49
NDE1-206ENST00000572967 MYOCQ99972 504 aa12□□□□□ -0.49
NDE1-206ENST00000572967 SPON2Q9BUD6 331 aa12□□□□□ -0.49
NDE1-206ENST00000572967 MAGEB5Q9BZ81 275 aa12□□□□□ -0.49
NDE1-206ENST00000572967 TNKS2Q9H2K2 1166 aa12□□□□□ -0.49
NDE1-206ENST00000572967 LRRC19Q9H756 370 aa12□□□□□ -0.49
NDE1-206ENST00000572967 ETNK2Q9NVF9 386 aa12□□□□□ -0.49
NDE1-206ENST00000572967 ZNF212Q9UDV6 495 aa12□□□□□ -0.49
NDE1-206ENST00000572967 AMACRQ9UHK6 382 aa12□□□□□ -0.49
NDE1-206ENST00000572967 IPO11Q9UI26 975 aaKnown RBP12□□□□□ -0.49
NDE1-206ENST00000572967 ZNF148Q9UQR1 794 aa12□□□□□ -0.49
NDE1-206ENST00000572967 APOBEC2Q9Y235 224 aaKnown RBP12□□□□□ -0.49
NDE1-206ENST00000572967 HS3ST2Q9Y278 367 aa12□□□□□ -0.49
NDE1-206ENST00000572967 CACNA1BQ00975 2339 aa12□□□□□ -0.49
NDE1-206ENST00000572967 TPRP12270 2363 aaKnown RBP12□□□□□ -0.49
NDE1-206ENST00000572967 ACACBO00763 2458 aa12□□□□□ -0.49
NDE1-206ENST00000572967 CBX4O00257 560 aa11.99□□□□□ -0.49
NDE1-206ENST00000572967 KPNA3O00505 521 aaPredicted RBP11.99□□□□□ -0.49
NDE1-206ENST00000572967 NDC80O14777 642 aa11.99□□□□□ -0.49
NDE1-206ENST00000572967 VILLO15195 856 aa11.99□□□□□ -0.49
NDE1-206ENST00000572967 ALOX15BO15296 676 aa11.99□□□□□ -0.49
NDE1-206ENST00000572967 SMAD6O43541 496 aaKnown RBP11.99□□□□□ -0.49
NDE1-206ENST00000572967 LIASO43766 372 aa11.99□□□□□ -0.49
NDE1-206ENST00000572967 TRIM16O95361 564 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms