RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 PCDH15Q96QU1 1955 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 DOCK9Q9BZ29 2069 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 ADAMTS9Q9P2N4 1935 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 C10orf142B7Z368 130 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 SPINT1O43278 529 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 LRP3O75074 770 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 CFIP05156 583 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 CCNB1P14635 433 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 CR2P20023 1033 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 SERPINA4P29622 427 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 MAT2AP31153 395 aaKnown RBP15.97■□□□□ 0.15
CHD3-215ENST00000572750 PTPN7P35236 360 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 CSNK1DP48730 415 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 COPS2P61201 443 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 AP1S1P61966 158 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 NSUN2Q08J23 767 aaKnown RBP eCLIP15.97■□□□□ 0.15
CHD3-215ENST00000572750 HNRNPDQ14103 355 aaKnown RBP15.97■□□□□ 0.15
CHD3-215ENST00000572750 GRM3Q14832 879 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 CFAP58Q5T655 872 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 BBS12Q6ZW61 710 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 ZSWIM9Q86XI8 627 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 DNASE2BQ8WZ79 361 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 P3H4Q92791 437 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 FATE1Q969F0 183 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 TUBGCP5Q96RT8 1024 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 ORAI3Q9BRQ5 295 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 CPEB1Q9BZB8 566 aaKnown RBP15.97■□□□□ 0.15
CHD3-215ENST00000572750 NOD2Q9HC29 1040 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 PREBQ9HCU5 417 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 FSCN3Q9NQT6 498 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 VPS45Q9NRW7 570 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 SEPT10Q9P0V9 454 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 PI4KAP42356 2102 aa15.97■□□□□ 0.15
CHD3-215ENST00000572750 LRRK1Q38SD2 2015 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 TSPAN11A1L157 253 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 NEBLO76041 1014 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 MAPK8P45983 427 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 NR2C2P49116 596 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 IFI35P80217 286 aaPredicted RBP15.96■□□□□ 0.15
CHD3-215ENST00000572750 DSC2Q02487 901 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 ITKQ08881 620 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 PRKD1Q15139 912 aaPredicted RBP15.96■□□□□ 0.15
CHD3-215ENST00000572750 CSRP2Q16527 193 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 TRIM61Q5EBN2 209 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 CCDC181Q5TID7 509 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 LAYNQ6UX15 382 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 ZC3H18Q86VM9 953 aaKnown RBP15.96■□□□□ 0.15
CHD3-215ENST00000572750 NUDCD1Q96RS6 583 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 SEMA3CQ99985 751 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 FAM118BQ9BPY3 351 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 POLR1EQ9GZS1 481 aaKnown RBP15.96■□□□□ 0.15
CHD3-215ENST00000572750 KDM4CQ9H3R0 1056 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 SUV39H2Q9H5I1 410 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 EBF2Q9HAK2 575 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 RBM22Q9NW64 420 aaKnown RBP eCLIP15.96■□□□□ 0.15
CHD3-215ENST00000572750 FADS3Q9Y5Q0 445 aa15.96■□□□□ 0.15
CHD3-215ENST00000572750 A0A1W2PQU0 124 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 LNP1A1A4G5 178 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 APOC4-APOC2K7ER74 178 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 RNGTTO60942 597 aaKnown RBP15.95■□□□□ 0.14
CHD3-215ENST00000572750 PCDH8O95206 1070 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 JCHAINP01591 159 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 APOC2P02655 101 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 PRKCGP05129 697 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 ZNF806P0C7X5 589 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 PRLRP16471 622 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 ITIH2P19823 946 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 CD27P26842 260 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 HOXD12P35452 270 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 DPP6P42658 865 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 CCR5P51681 352 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 OTUD4Q01804 1114 aaKnown RBP15.95■□□□□ 0.14
CHD3-215ENST00000572750 BCL2L1Q07817 233 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 CCDC15Q0P6D6 951 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 TRAF2Q12933 501 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 SEL1L3Q68CR1 1132 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 TRIM69Q86WT6 500 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 PAF1Q8N7H5 531 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 C12orf50Q8NA57 414 aaPredicted RBP15.95■□□□□ 0.14
CHD3-215ENST00000572750 PDCD6IPQ8WUM4 868 aaKnown RBP15.95■□□□□ 0.14
CHD3-215ENST00000572750 TFB1MQ8WVM0 346 aaKnown RBP15.95■□□□□ 0.14
CHD3-215ENST00000572750 KLK6Q92876 244 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 ZNF641Q96N77 438 aaPredicted RBP15.95■□□□□ 0.14
CHD3-215ENST00000572750 SLC6A18Q96N87 628 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 QKIQ96PU8 341 aaKnown RBP eCLIP15.95■□□□□ 0.14
CHD3-215ENST00000572750 TMEM121BQ9BXQ6 578 aaPredicted RBP15.95■□□□□ 0.14
CHD3-215ENST00000572750 DKK3Q9UBP4 350 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 PCDHGC4Q9Y5F7 938 aa15.95■□□□□ 0.14
CHD3-215ENST00000572750 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.94■□□□□ 0.14
CHD3-215ENST00000572750 UPK3BL1B0FP48 263 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 UPK3BL2E5RIL1 263 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 NEMP1O14524 444 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 TRAFD1O14545 582 aaPredicted RBP15.94■□□□□ 0.14
CHD3-215ENST00000572750 BCAT2O15382 392 aaPredicted RBP15.94■□□□□ 0.14
CHD3-215ENST00000572750 LATO43561 262 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 AP1G1O43747 822 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 ZIC2O95409 532 aaPredicted RBP15.94■□□□□ 0.14
CHD3-215ENST00000572750 TIMP2P16035 220 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 CETN2P41208 172 aa15.94■□□□□ 0.14
CHD3-215ENST00000572750 SEMG2Q02383 582 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms