RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 SYNCQ9H7C4 482 aa11.47□□□□□ -0.57
CHMP6-202ENST00000571457 UBE2TQ9NPD8 197 aaPredicted RBP11.47□□□□□ -0.57
CHMP6-202ENST00000571457 KLQ9UEF7 1012 aa11.47□□□□□ -0.57
CHMP6-202ENST00000571457 PCDHGA3Q9Y5H0 932 aa11.47□□□□□ -0.57
CHMP6-202ENST00000571457 DOCK4Q8N1I0 1966 aa11.47□□□□□ -0.57
CHMP6-202ENST00000571457 DOPEY1Q5JWR5 2465 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 PSMA7O14818 248 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 NUDT21O43809 227 aaKnown RBP11.46□□□□□ -0.57
CHMP6-202ENST00000571457 SRGAP2O75044 1071 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 GSRP00390 522 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 TNFP01375 233 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 SUOXP51687 545 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 PMS1P54277 932 aaKnown RBP11.46□□□□□ -0.57
CHMP6-202ENST00000571457 KRT85P78386 507 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 ARF5P84085 180 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 SLC6A3Q01959 620 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 DEUP1Q05D60 604 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 RAD51Q06609 339 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 STIM1Q13586 685 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 IRF4Q15306 451 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 TCEA2Q15560 299 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 MYLK3Q32MK0 819 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 C14orf28Q4W4Y0 310 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 OGFOD3Q6PK18 319 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 GDPD4Q6W3E5 623 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 FAM183BPQ6ZVS7 135 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 ZDHHC17Q8IUH5 632 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 FAM46DQ8NEK8 389 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 PGAP3Q96FM1 320 aaPredicted RBP11.46□□□□□ -0.57
CHMP6-202ENST00000571457 FAM81BQ96LP2 452 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 KLHL32Q96NJ5 620 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 GSDMAQ96QA5 445 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 RBM15Q96T37 977 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHMP6-202ENST00000571457 NPY6RQ99463 290 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 ZYG11BQ9C0D3 744 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHMP6-202ENST00000571457 LRIT1Q9P2V4 623 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 HPCAL4Q9UM19 191 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 SNX10Q9Y5X0 201 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 DGKBQ9Y6T7 804 aa11.46□□□□□ -0.57
CHMP6-202ENST00000571457 LRRK1Q38SD2 2015 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 TRIM49BA6NDI0 452 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 SMC2O95347 1197 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 XPAP23025 273 aaPredicted RBP11.45□□□□□ -0.58
CHMP6-202ENST00000571457 GKP32189 559 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 ELP6Q0PNE2 266 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 PNOCQ13519 176 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 C16orf72Q14CZ0 275 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 EFHC2Q5JST6 749 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 TAF8Q7Z7C8 310 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 DRC7Q8IY82 874 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 C1orf131Q8NDD1 294 aaKnown RBP11.45□□□□□ -0.58
CHMP6-202ENST00000571457 KIAA1524Q8TCG1 905 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 ARHGEF2Q92974 986 aaKnown RBP11.45□□□□□ -0.58
CHMP6-202ENST00000571457 NT5C3BQ969T7 300 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 WDR92Q96MX6 357 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 GDAP1L1Q96MZ0 367 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 HAPLN3Q96S86 360 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 WRAP53Q9BUR4 548 aaKnown RBP11.45□□□□□ -0.58
CHMP6-202ENST00000571457 APOOQ9BUR5 198 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 ASPSCR1Q9BZE9 553 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 INTS2Q9H0H0 1204 aaKnown RBP11.45□□□□□ -0.58
CHMP6-202ENST00000571457 SEMA6CQ9H3T2 930 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 RETREG1Q9H6L5 497 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 ANLNQ9NQW6 1124 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 ZNF71Q9NQZ8 489 aaPredicted RBP11.45□□□□□ -0.58
CHMP6-202ENST00000571457 DKK3Q9UBP4 350 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 ZNF212Q9UDV6 495 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 DACH1Q9UI36 760 aa11.45□□□□□ -0.58
CHMP6-202ENST00000571457 ARHGEF17Q96PE2 2063 aaPredicted RBP11.44□□□□□ -0.58
CHMP6-202ENST00000571457 I6L893 689 aaPredicted RBP11.44□□□□□ -0.58
CHMP6-202ENST00000571457 CD160O95971 181 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 CCL4P13236 92 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 LIFP15018 202 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 KELP23276 732 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 UGT1A3P35503 534 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 USP8P40818 1118 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 CD97P48960 835 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 SULT1E1P49888 294 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 RNASE9P60153 205 aaKnown RBP11.44□□□□□ -0.58
CHMP6-202ENST00000571457 TRA2AQ13595 282 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHMP6-202ENST00000571457 SEPT6Q14141 434 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 HLTFQ14527 1009 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHMP6-202ENST00000571457 INPP5AQ14642 412 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 WSCD2Q2TBF2 565 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 SLC25A52Q3SY17 297 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 LRRC73Q5JTD7 316 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 OTUD1Q5VV17 481 aaPredicted RBP11.44□□□□□ -0.58
CHMP6-202ENST00000571457 IRF2BP1Q8IU81 584 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 PASD1Q8IV76 773 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 CACNA2D3Q8IZS8 1091 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 WDTC1Q8N5D0 677 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 SPATA20Q8TB22 786 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 KIAA1143Q96AT1 154 aaPredicted RBP11.44□□□□□ -0.58
CHMP6-202ENST00000571457 MIB2Q96AX9 1013 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 DHTKD1Q96HY7 919 aaPredicted RBP11.44□□□□□ -0.58
CHMP6-202ENST00000571457 SLC45A3Q96JT2 553 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 EFHD1Q9BUP0 239 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 DDA1Q9BW61 102 aa11.44□□□□□ -0.58
CHMP6-202ENST00000571457 DPEP2Q9H4A9 486 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms