RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 OSBPL5Q9H0X9 879 aaPredicted RBP4.4□□□□□ -1.71
NUP88-202ENST00000570937 SPAG4Q9NPE6 437 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.4□□□□□ -1.71
NUP88-202ENST00000570937 PAG1Q9NWQ8 432 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 SAGE1Q9NXZ1 904 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 AATFQ9NY61 560 aaKnown RBP eCLIP4.4□□□□□ -1.71
NUP88-202ENST00000570937 DACT1Q9NYF0 836 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 C19orf53Q9UNZ5 99 aaPredicted RBP4.4□□□□□ -1.71
NUP88-202ENST00000570937 COG5Q9UP83 839 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 SLC8A2Q9UPR5 921 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 LZTS1Q9Y250 596 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 DTX4Q9Y2E6 619 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 TTC41PQ6P2S7 1318 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 A0A1B0GUL6 1792 aa4.4□□□□□ -1.71
NUP88-202ENST00000570937 RPAP1Q9BWH6 1393 aaPredicted RBP4.4□□□□□ -1.71
NUP88-202ENST00000570937 PCNTO95613 3336 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 FOXO6A8MYZ6 492 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 B4DGG1 531 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 H3BNX3 289 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 RHODO00212 210 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 ACKR2O00590 384 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 TRIM38O00635 465 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 LCKP06239 509 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 ZFYP08048 801 aaPredicted RBP4.39□□□□□ -1.71
NUP88-202ENST00000570937 ITGB6P18564 788 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 MX1P20591 662 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 SCP2P22307 547 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 CIITAP33076 1130 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 RCAN1P53805 252 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 PPATQ06203 517 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 ARHGEF6Q15052 776 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 C6orf10Q5SRN2 563 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 C10orf76Q5T2E6 689 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 KLHL17Q6TDP4 642 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 ZNF517Q6ZMY9 492 aaPredicted RBP4.39□□□□□ -1.71
NUP88-202ENST00000570937 C9orf47Q6ZRZ4 202 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 RFX8Q6ZV50 586 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 MOB2Q70IA6 237 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 CYB5R4Q7L1T6 521 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 TICAM2Q86XR7 235 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 ERO1BQ86YB8 467 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 CACNA2D3Q8IZS8 1091 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 ATG16L2Q8NAA4 619 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 KAT2AQ92830 837 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 SLC25A28Q96A46 364 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 OPTNQ96CV9 577 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 NLRP4Q96MN2 994 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 DDX23Q9BUQ8 820 aaKnown RBP4.39□□□□□ -1.71
NUP88-202ENST00000570937 SORBS1Q9BX66 1292 aaKnown RBP4.39□□□□□ -1.71
NUP88-202ENST00000570937 CRNKL1Q9BZJ0 848 aaKnown RBP4.39□□□□□ -1.71
NUP88-202ENST00000570937 FAM234AQ9H0X4 552 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 BOLA2Q9H3K6 86 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 EBF3Q9H4W6 596 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 FZD3Q9NPG1 666 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 PIH1D3Q9NQM4 214 aaKnown RBP4.39□□□□□ -1.71
NUP88-202ENST00000570937 TAGLN3Q9UI15 199 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 TNFSF13BQ9Y275 285 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 DAAM1Q9Y4D1 1078 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 SQORQ9Y6N5 450 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 PAPPA2Q9BXP8 1791 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 TRPM7Q96QT4 1865 aa4.39□□□□□ -1.71
NUP88-202ENST00000570937 ARAP2Q8WZ64 1704 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 TMEM272A0A1B0GTI8 110 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 A6NNC1 897 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 F5H423 210 aaPredicted RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 ZC3H11AO75152 810 aaKnown RBP eCLIP4.38□□□□□ -1.71
NUP88-202ENST00000570937 HEXIM1O94992 359 aaKnown RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 NFATC1O95644 943 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 IFNA2P01563 188 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 CRYABP02511 175 aaKnown RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 CETPP11597 493 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 LBX1P52954 281 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 RHBDL3P58872 404 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 RNASELQ05823 741 aaKnown RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 BLMHQ13867 455 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 VGLL4Q14135 290 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 GALNTL6Q49A17 601 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 FASTKD5Q7L8L6 764 aaKnown RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 SCYL3Q8IZE3 742 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 ENDOVQ8N8Q3 282 aaKnown RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 MIGA1Q8NAN2 632 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 EXOC6Q8TAG9 804 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 OTUD7AQ8TE49 926 aaPredicted RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 POF1BQ8WVV4 589 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 CPT1BQ92523 772 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 CENPIQ92674 756 aaPredicted RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 ZKSCAN4Q969J2 545 aaPredicted RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 ADAD1Q96M93 576 aaKnown RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 NACAP1Q9BZK3 213 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 ABHD16BQ9H3Z7 469 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 ELAC1Q9H777 363 aaKnown RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 ZCCHC17Q9NP64 241 aaKnown RBP4.38□□□□□ -1.71
NUP88-202ENST00000570937 ATP8A2Q9NTI2 1148 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 RNF186Q9NXI6 227 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 NDUFAF4Q9P032 175 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 LRFN1Q9P244 771 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 ZNF112Q9UJU3 913 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 PKP3Q9Y446 797 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 PCDHA10Q9Y5I2 948 aa4.38□□□□□ -1.71
NUP88-202ENST00000570937 ZNF532Q9HCE3 1301 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms