RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 TAF3Q5VWG9 929 aa19.2■□□□□ 0.66
SCARF1-204ENST00000570902 IRF2BP1Q8IU81 584 aa19.2■□□□□ 0.66
SCARF1-204ENST00000570902 VOPP1Q96AW1 172 aa19.2■□□□□ 0.66
SCARF1-204ENST00000570902 WRAP53Q9BUR4 548 aaKnown RBP19.2■□□□□ 0.66
SCARF1-204ENST00000570902 CPEB1Q9BZB8 566 aaKnown RBP19.2■□□□□ 0.66
SCARF1-204ENST00000570902 FOXP3Q9BZS1 431 aa19.2■□□□□ 0.66
SCARF1-204ENST00000570902 TTYH3Q9C0H2 523 aa19.2■□□□□ 0.66
SCARF1-204ENST00000570902 IL17BQ9UHF5 180 aa19.2■□□□□ 0.66
SCARF1-204ENST00000570902 RABGEF1Q9UJ41 708 aa19.2■□□□□ 0.66
SCARF1-204ENST00000570902 GPR34Q9UPC5 381 aa19.2■□□□□ 0.66
SCARF1-204ENST00000570902 CYSRT1A8MQ03 144 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 NVLO15381 856 aaKnown RBP19.19■□□□□ 0.66
SCARF1-204ENST00000570902 BUB1O43683 1085 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 NOBOXO60393 691 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 XPAP23025 273 aaPredicted RBP19.19■□□□□ 0.66
SCARF1-204ENST00000570902 NFATC4Q14934 902 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 ALG11Q2TAA5 492 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 LINC00303Q3SY05 128 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 TMEM52BQ4KMG9 183 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 LEKR1Q6ZMV7 388 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 TSACCQ96A04 125 aaPredicted RBP19.19■□□□□ 0.66
SCARF1-204ENST00000570902 TMEM159Q96B96 161 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 TBC1D31Q96DN5 1066 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 LRRN3Q9H3W5 708 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 METTL5Q9NRN9 209 aaKnown RBP19.19■□□□□ 0.66
SCARF1-204ENST00000570902 MFHAS1Q9Y4C4 1052 aa19.19■□□□□ 0.66
SCARF1-204ENST00000570902 A0A1W2PQM1 296 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 TMCC1O94876 653 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 LRIG2O94898 1065 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 TIMP2P16035 220 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 SDC4P31431 198 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 CDO1Q16878 200 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 TPD52L1Q16890 204 aaPredicted RBP19.18■□□□□ 0.66
SCARF1-204ENST00000570902 INO80DQ53TQ3 878 aaPredicted RBP19.18■□□□□ 0.66
SCARF1-204ENST00000570902 ENPP7Q6UWV6 458 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 ZNF354CQ86Y25 554 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 FAM114A1Q8IWE2 563 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 EMC1Q8N766 993 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 HCAR2Q8TDS4 363 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 CPA5Q8WXQ8 436 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 STARD5Q9NSY2 213 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 KIAA1468Q9P260 1216 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 PISDQ9UG56 409 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 LOXL2Q9Y4K0 774 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 CHD5Q8TDI0 1954 aa19.18■□□□□ 0.66
SCARF1-204ENST00000570902 FAM170AA1A519 330 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 PLEKP08567 350 aaPredicted RBP19.17■□□□□ 0.66
SCARF1-204ENST00000570902 HGFP14210 728 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 PRKCSHP14314 528 aaPredicted RBP19.17■□□□□ 0.66
SCARF1-204ENST00000570902 SRP54P61011 504 aaKnown RBP19.17■□□□□ 0.66
SCARF1-204ENST00000570902 RHOAP61586 193 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 NOMO3P69849 1222 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 TGIF1Q15583 401 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 CAMK4Q16566 473 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 WSCD2Q2TBF2 565 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 MANEAQ5SRI9 462 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 NAA35Q5VZE5 725 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 ATG14Q6ZNE5 492 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 RD3Q7Z3Z2 195 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 CCNJLQ8IV13 435 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 ZSCAN1Q8NBB4 408 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 EXTL1Q92935 676 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 APOOQ9BUR5 198 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 NDST4Q9H3R1 872 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 KLQ9UEF7 1012 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 APPL1Q9UKG1 709 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 NEU3Q9UQ49 428 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 HECTD1Q9ULT8 2610 aa19.17■□□□□ 0.66
SCARF1-204ENST00000570902 FAM72CH0Y354 149 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 ITIH2P19823 946 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 INPP5AQ14642 412 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 GRM3Q14832 879 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 TCEA2Q15560 299 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 C15orf59Q2T9L4 293 aaPredicted RBP19.16■□□□□ 0.66
SCARF1-204ENST00000570902 CCDC14Q49A88 953 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 VWA3BQ502W6 1294 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 FAM72AQ5TYM5 149 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 FAM72DQ6L9T8 149 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 DPY19L2P1Q6NXN4 242 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 STRADAQ7RTN6 431 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 NOP9Q86U38 636 aaKnown RBP19.16■□□□□ 0.66
SCARF1-204ENST00000570902 FAM72BQ86X60 149 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 GPR156Q8NFN8 814 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 RXFP2Q8WXD0 754 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 WDR92Q96MX6 357 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 RBM15Q96T37 977 aaKnown RBP eCLIP19.16■□□□□ 0.66
SCARF1-204ENST00000570902 CMKLR1Q99788 373 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 NCAPGQ9BPX3 1015 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 COQ6Q9Y2Z9 468 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 PCDHB11Q9Y5F2 797 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 FHOD1Q9Y613 1164 aa19.16■□□□□ 0.66
SCARF1-204ENST00000570902 TERTO14746 1132 aaKnown RBP19.15■□□□□ 0.66
SCARF1-204ENST00000570902 TNFP01375 233 aa19.15■□□□□ 0.66
SCARF1-204ENST00000570902 MMEP08473 750 aa19.15■□□□□ 0.66
SCARF1-204ENST00000570902 PNLIPP16233 465 aa19.15■□□□□ 0.66
SCARF1-204ENST00000570902 GLB1P16278 677 aa19.15■□□□□ 0.66
SCARF1-204ENST00000570902 PTPN9P43378 593 aa19.15■□□□□ 0.66
SCARF1-204ENST00000570902 ZFP36L1Q07352 338 aaKnown RBP19.15■□□□□ 0.66
SCARF1-204ENST00000570902 AGERQ15109 404 aa19.15■□□□□ 0.66
SCARF1-204ENST00000570902 RAB6CQ53S08 254 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms