RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 NAPGQ99747 312 aaPredicted RBP15.32■□□□□ 0.04
RAB40B-203ENST00000570676 SNRNP25Q9BV90 132 aaKnown RBP15.32■□□□□ 0.04
RAB40B-203ENST00000570676 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
RAB40B-203ENST00000570676 GPATCH2LQ9NWQ4 482 aa15.32■□□□□ 0.04
RAB40B-203ENST00000570676 FADS3Q9Y5Q0 445 aa15.32■□□□□ 0.04
RAB40B-203ENST00000570676 TDRD6O60522 2096 aaKnown RBP15.32■□□□□ 0.04
RAB40B-203ENST00000570676 ASPMQ8IZT6 3477 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 ZSCAN5CA6NGD5 496 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-203ENST00000570676 GOLGA8CPA6NN73 597 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 DDX3YO15523 660 aaKnown RBP15.31■□□□□ 0.04
RAB40B-203ENST00000570676 AP1G1O43747 822 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 MAGEC1O60732 1142 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 TMCC1O94876 653 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 PCDH8O95206 1070 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 THEGLP0DJG4 465 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 HNRNPA2B1P22626 353 aaKnown RBP15.31■□□□□ 0.04
RAB40B-203ENST00000570676 ATP13A4Q4VNC1 1196 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 ATXN7L2Q5T6C5 722 aaPredicted RBP15.31■□□□□ 0.04
RAB40B-203ENST00000570676 ERMARDQ5T6L9 678 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 KIAA1161Q6NSJ0 714 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 ABI3BPQ7Z7G0 1075 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 UMODL1-AS1Q8N2C9 162 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 OR13H1Q8NG92 308 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 TEKT4Q8WW24 435 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 LRIG1Q96JA1 1093 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 EPAS1Q99814 870 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 GPR27Q9NS67 375 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.31■□□□□ 0.04
RAB40B-203ENST00000570676 KLHL11Q9NVR0 708 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 DDX56Q9NY93 547 aaKnown RBP15.31■□□□□ 0.04
RAB40B-203ENST00000570676 GGT7Q9UJ14 662 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 HPCAL4Q9UM19 191 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 AP4E1Q9UPM8 1137 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 SPEGQ15772 3267 aa15.31■□□□□ 0.04
RAB40B-203ENST00000570676 C16orf96A6NNT2 1141 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 RASA4BC9J798 803 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 FANCGO15287 622 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 FGF10O15520 208 aaPredicted RBP15.3■□□□□ 0.04
RAB40B-203ENST00000570676 RASA4O43374 803 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 SDC3O75056 442 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 LRP4O75096 1905 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 KRT1P04264 644 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 AKT2P31751 481 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 HTR7P34969 479 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 ACADVLP49748 655 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 PEX5P50542 639 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 RWDD2BP57060 319 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 CLDN2P57739 230 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 YBEYP58557 167 aaPredicted RBP15.3■□□□□ 0.04
RAB40B-203ENST00000570676 SNRPD1P62314 119 aaKnown RBP15.3■□□□□ 0.04
RAB40B-203ENST00000570676 SERINC3Q13530 473 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 MYLKQ15746 1914 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 CA9Q16790 459 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 ODF2Q5BJF6 829 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 ZNF805Q5CZA5 627 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 FBXL19Q6PCT2 694 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 PSTKQ8IV42 348 aaKnown RBP15.3■□□□□ 0.04
RAB40B-203ENST00000570676 KATNAL2Q8IYT4 538 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 SLC22A18ASQ8N1D0 253 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 EID2Q8N6I1 236 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 NETO2Q8NC67 525 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 CASKIN2Q8WXE0 1202 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 ZNF592Q92610 1267 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 ALG3Q92685 438 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 KLHDC7BQ96G42 594 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 CNDP2Q96KP4 475 aaKnown RBP15.3■□□□□ 0.04
RAB40B-203ENST00000570676 GDAP1L1Q96MZ0 367 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 DHX35Q9H5Z1 703 aaKnown RBP15.3■□□□□ 0.04
RAB40B-203ENST00000570676 CATSPERBQ9H7T0 1116 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 CAAP1Q9H8G2 361 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 PDFQ9HBH1 243 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 LHX3Q9UBR4 397 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 ITM2BQ9Y287 266 aa15.3■□□□□ 0.04
RAB40B-203ENST00000570676 SRRM3A6NNA2 597 aaPredicted RBP15.29■□□□□ 0.04
RAB40B-203ENST00000570676 KRIT1O00522 736 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 RAD51BO15315 384 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 UGT2B4P06133 528 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 TPI1P60174 286 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 RPS21P63220 83 aaKnown RBP15.29■□□□□ 0.04
RAB40B-203ENST00000570676 DNAJC3Q13217 504 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 KRT81Q14533 505 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 SMAD1Q15797 465 aaKnown RBP15.29■□□□□ 0.04
RAB40B-203ENST00000570676 MYLK3Q32MK0 819 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 PARP15Q460N3 678 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 INO80DQ53TQ3 878 aaPredicted RBP15.29■□□□□ 0.04
RAB40B-203ENST00000570676 DHRS13Q6UX07 377 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 KYAT3Q6YP21 454 aaKnown RBP15.29■□□□□ 0.04
RAB40B-203ENST00000570676 MARCH9Q86YJ5 346 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 RYBPQ8N488 228 aaPredicted RBP15.29■□□□□ 0.04
RAB40B-203ENST00000570676 KCTD6Q8NC69 237 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 TSC1Q92574 1164 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 RAB7BQ96AH8 199 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 KLF6Q99612 283 aaPredicted RBP15.29■□□□□ 0.04
RAB40B-203ENST00000570676 LRRC19Q9H756 370 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 SNX12Q9UMY4 172 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 PCDHGA1Q9Y5H4 931 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 ZFHX4Q86UP3 3567 aa15.29■□□□□ 0.04
RAB40B-203ENST00000570676 LRRD1A4D1F6 860 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 A6NNZ2 444 aa15.28■□□□□ 0.04
RAB40B-203ENST00000570676 TAF4O00268 1085 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms