RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 COL27A1Q8IZC6 1860 aaPredicted RBP17.26■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TPP1O14773 563 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 INSIG1O15503 277 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 DAPK3O43293 454 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 CYP1A2P05177 515 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 IL1R2P27930 398 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 IGFALSP35858 605 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 PEX5P50542 639 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 PDE1CQ14123 709 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 PPP6R3Q5H9R7 873 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 POLNQ7Z5Q5 900 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SRLQ86TD4 932 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ZNF548Q8NEK5 533 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 MDM1Q8TC05 714 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 FAM71BQ8TC56 605 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 EXOC2Q96KP1 924 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 PSKH2Q96QS6 385 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 NRSN2Q9GZP1 204 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ATP13A3Q9H7F0 1226 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 NCKIPSDQ9NZQ3 722 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 LUC7L2Q9Y383 392 aaKnown RBP17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SHROOM3Q8TF72 1996 aa17.25■□□□□ 0.35
MAP1LC3B-208ENST00000570189 URB1O60287 2271 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ITPR1Q14643 2758 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 LY6G6EA0A0G2JKS1 128 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 GOLGA6L19H0YKK7 550 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 H3BRJ5 948 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 BUB1BO60566 1050 aaPredicted RBP17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 MMP20O60882 483 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 PALMO75781 387 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 PIGNO95427 931 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 GYPCP04921 128 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SERPINA4P29622 427 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 HSPA9P38646 679 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 MMP12P39900 470 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 RENBPP51606 427 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 EIF2B5Q13144 721 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 RTP5Q14D33 572 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TPRG1LQ5T0D9 272 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 HES3Q5TGS1 186 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ZCCHC8Q6NZY4 707 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 MACC1Q6ZN28 852 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 DCBLD1Q8N8Z6 715 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TSEN2Q8NCE0 465 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 NXPE2Q96DL1 559 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 THAP2Q9H0W7 228 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SCUBE2Q9NQ36 999 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 EVA1BQ9NVM1 165 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 RCOR3Q9P2K3 495 aaPredicted RBP17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 MYO1AQ9UBC5 1043 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 IP6K2Q9UHH9 426 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 IPO11Q9UI26 975 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SALL4Q9UJQ4 1053 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 GPSM3Q9Y4H4 160 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 U3KQA8 63 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ASXL3Q9C0F0 2248 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 NBEAQ8NFP9 2946 aa17.24■□□□□ 0.35
MAP1LC3B-208ENST00000570189 CELSR3Q9NYQ7 3312 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 A0A087X0T9 212 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 FAM149AA5PLN7 773 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TMEM110-MUSTN1A8MSY1 372 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 K7ESM1 405 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TRAFD1O14545 582 aaPredicted RBP17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 FAM228BP0C875 321 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 JUPP14923 745 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ARL4AP40617 200 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 RGRP47804 291 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 DUSP3P51452 185 aaPredicted RBP17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 AP1S1P61966 158 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 INSM1Q01101 510 aaPredicted RBP17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SLC25A11Q02978 314 aaKnown RBP17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 RALGPS1Q5JS13 557 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ERAP2Q6P179 960 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 NETO2Q8NC67 525 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 APOLD1Q96LR9 279 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SP110Q9HB58 689 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 PCDH12Q9NPG4 1184 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SEPT3Q9UH03 358 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 KLF15Q9UIH9 416 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ATP8A1Q9Y2Q0 1164 aa17.23■□□□□ 0.35
MAP1LC3B-208ENST00000570189 A0A1W2PQ67 120 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 AQP9O43315 295 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 PEX11BO96011 259 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 RARAP10276 462 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TCF4P15884 667 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 JUNDP17535 347 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 CR2P20023 1033 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 XPAP23025 273 aaPredicted RBP17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 SERPINB6P35237 376 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 THOP1P52888 689 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 POLR2LP62875 67 aaKnown RBP17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ZSCAN23Q3MJ62 389 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 CCDC157Q569K6 752 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 LRRC73Q5JTD7 316 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 CDCP2Q5VXM1 449 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ALKBH5Q6P6C2 394 aaKnown RBP17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 TMCO3Q6UWJ1 677 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ARHGAP36Q6ZRI8 547 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 ZSWIM9Q86XI8 627 aa17.22■□□□□ 0.35
MAP1LC3B-208ENST00000570189 MARCH9Q86YJ5 346 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms