RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	PLD5	Q8N7P1	536 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	RNF25	Q96BH1	459 aa	Predicted RBP	18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	HAUS1	Q96CS2	278 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	ALS2CR12	Q96Q35	445 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	VAT1	Q99536	393 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	SMOC1	Q9H4F8	434 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	RPL26L1	Q9UNX3	145 aa	Known RBP	18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	HEY1	Q9Y5J3	304 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	ACTL7A	Q9Y615	435 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	GOLGA6L9	A6NEM1	432 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	HACD1	B0YJ81	288 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	TLR4	O00206	839 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	FPGT	O14772	594 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	TM7SF2	O76062	418 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	TJP3	O95049	919 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	PEX11B	O96011	259 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	TNNT3	P45378	269 aa	Predicted RBP	18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	CSNK1E	P49674	416 aa	Known RBP	18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	ITK	Q08881	620 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	TMEM52B	Q4KMG9	183 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	LRRC8A	Q8IWT6	810 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	RAVER1	Q8IY67	606 aa	Known RBP	18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	ACRBP	Q8NEB7	543 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	ECHDC3	Q96DC8	303 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	IFT43	Q96FT9	208 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	KLHDC7B	Q96G42	594 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	EXOC2	Q96KP1	924 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	PPP1R2P1	Q96PQ5	205 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	SRPK1	Q96SB4	655 aa	Known RBP	18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	C1QTNF2	Q9BXJ5	285 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	RBM22	Q9NW64	420 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	PHTF1	Q9UMS5	762 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150	ATP8A1	Q9Y2Q0	1164 aa		18.15	■□□□□ 0.5
PKD1-238	ENST00000570150		A6NNZ2	444 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	CDX4	O14627	284 aa	Predicted RBP	18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	RIOK3	O14730	519 aa	Known RBP	18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	HTRA2	O43464	458 aa	Predicted RBP	18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	CST8	O60676	142 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	CYP2A6	P11509	494 aa	Predicted RBP	18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	CEACAM1	P13688	526 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	CR2	P20023	1033 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	RABIF	P47224	123 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	CCT8	P50990	548 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	METAP1	P53582	386 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	PPP2CB	P62714	309 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	PPP2CA	P67775	309 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	IFI35	P80217	286 aa	Predicted RBP	18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	GBE1	Q04446	702 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	XRCC4	Q13426	336 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	SLC14A2	Q15849	920 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	ARMC12	Q5T9G4	340 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	ARHGAP36	Q6ZRI8	547 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	USP45	Q70EL2	814 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	TTC13	Q8NBP0	860 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	ATL2	Q8NHH9	583 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	TFB1M	Q8WVM0	346 aa	Known RBP	18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	ORAI3	Q9BRQ5	295 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	LACRT	Q9GZZ8	138 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	GAREM1	Q9H706	876 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	REXO2	Q9Y3B8	237 aa	Known RBP	18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	ADGRG1	Q9Y653	693 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150	SDK1	Q7Z5N4	2213 aa		18.14	■□□□□ 0.49
PKD1-238	ENST00000570150		A0A1B0GVT2	93 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	MACROD2	A1Z1Q3	448 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	APOC4-APOC2	K7ER74	178 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	PLK4	O00444	970 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	FLRT2	O43155	660 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	PCDHGA12	O60330	932 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	GDF9	O60383	454 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	STK10	O94804	968 aa	Known RBP	18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	APOC2	P02655	101 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	TIMP2	P16035	220 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	MAT2A	P31153	395 aa	Known RBP	18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	CTSK	P43235	329 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	AP1B1	Q10567	949 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	PTK2B	Q14289	1009 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	AGER	Q15109	404 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	HLA-B	Q31612	363 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	MFSD7	Q6UXD7	560 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	CAMK1D	Q8IU85	385 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	LRRC57	Q8N9N7	239 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	TMEM145	Q8NBT3	493 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	LRRC45	Q96CN5	670 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	SLC6A18	Q96N87	628 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	OLFM3	Q96PB7	478 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	ADGRE3	Q9BY15	652 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	NT5M	Q9NPB1	228 aa		18.13	■□□□□ 0.49
PKD1-238	ENST00000570150	CACNA1A	O00555	2505 aa		18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	NUP205	Q92621	2012 aa		18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	hCG_1818297	A0A087WSY0	165 aa		18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	MED19	A0JLT2	244 aa	Predicted RBP	18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	RCCD1	A6NED2	376 aa		18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	TRAFD1	O14545	582 aa	Predicted RBP	18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	SLC31A1	O15431	190 aa		18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	PIGN	O95427	931 aa		18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	CP	P00450	1065 aa		18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	GK	P32189	559 aa		18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	YPEL5	P62699	121 aa		18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	ZNF423	Q2M1K9	1284 aa		18.12	■□□□□ 0.49
PKD1-238	ENST00000570150	KIF19	Q2TAC6	998 aa		18.12	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 64 ms