RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 MTRRQ9UBK8 725 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 RASAL2Q9UJF2 1139 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 STX8Q9UNK0 236 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 UBE2J1Q9Y385 318 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 ZFP37Q9Y6Q3 630 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 DDX49Q9Y6V7 483 aaKnown RBP3.36□□□□□ -1.87
CNOT1-221ENST00000569924 WDR19Q8NEZ3 1342 aa3.36□□□□□ -1.87
CNOT1-221ENST00000569924 XIRP2A4UGR9 3374 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TRIP12Q14669 1992 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TBC1D3DA0A087WVF3 549 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TBC1D3IA0A087WXS9 549 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TBC1D3EA0A087X179 549 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TBC1D3KA0A087X1G2 549 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 FRMD3A2A2Y4 597 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TBC1D3BA6NDS4 549 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TBC1D3FA6NER0 549 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 C16orf96A6NNT2 1141 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 A8MXE2 369 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 PRR5-ARHGAP8B1AHC4 643 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TBC1D3LB9A6J9 549 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 E7ENX8 843 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 GCOM1H8Y6P7 765 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RFXAPO00287 272 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 SYN3O14994 580 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TP73O15350 636 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 NKX2-8O15522 239 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 SLC7A4O43246 635 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RANBP6O60518 1105 aaKnown RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 NMT2O60551 498 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 WDR47O94967 919 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 METTL18O95568 372 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 AFPP02771 609 aaKnown RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 CFIP05156 583 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 CYP3A4P08684 503 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TBC1D3HP0C7X1 549 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TOP1P11387 765 aaKnown RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 PCP11498 1178 aaKnown RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 CD19P15391 556 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 IFNAR1P17181 557 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 ITGALP20701 1170 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 GCSHP23434 173 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RPL13P26373 211 aaKnown RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 CALML3P27482 149 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 MSX2P35548 267 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 PBX1P40424 430 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 PIK3CAP42336 1068 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 NT5C2P49902 561 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 HSD17B4P51659 736 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF41P51814 821 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 CDR1P51861 262 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RCAN1P53805 252 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RAD23AP54725 363 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TIRAPP58753 221 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 SNAP25P60880 206 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RPL15P61313 204 aaKnown RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 WDR5P61964 334 aaKnown RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RPS6P62753 249 aaKnown RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 PRAMEP78395 509 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RBP5P82980 135 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TAP2Q03519 686 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 GOLGA8FQ08AF8 430 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TMEM115Q12893 351 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 SEMA3BQ13214 749 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 DOC2BQ14184 412 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 KCNJ12Q14500 433 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 IRF3Q14653 427 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 SMC1AQ14683 1233 aaKnown RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 NAA25Q14CX7 972 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 PPP2R5BQ15173 497 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 CSRP2Q16527 193 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 PTGISQ16647 500 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RSPO4Q2I0M5 234 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 SLC9B1Q4ZJI4 515 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 ARHGAP40Q5TG30 622 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 FAM90A2PQ658T7 463 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 ANKRD40Q6AI12 368 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TBC1D3GQ6DHY5 549 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TBC1D3CQ6IPX1 549 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RGS7BPQ6MZT1 257 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TTI2Q6NXR4 508 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TMEM154Q6P9G4 183 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 KLHL35Q6PF15 583 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 C11orf88Q6PI97 169 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RNF207Q6ZRF8 634 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 DENND5BQ6ZUT9 1274 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RTL10Q7L3V2 364 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TMPRSS9Q7Z410 1059 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 LURAP1LQ8IV03 231 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 SCN4BQ8IWT1 228 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 TBC1D3Q8IZP1 549 aaPredicted RBP3.35□□□□□ -1.87
CNOT1-221ENST00000569924 KLHL36Q8N4N3 616 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 C11orf44Q8N8P7 122 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 POMGNT2Q8NAT1 580 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RNF169Q8NCN4 708 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 OR8H1Q8NGG4 311 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 ARNTL2Q8WYA1 636 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 SNX21Q969T3 373 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF653Q96CK0 615 aa3.35□□□□□ -1.87
CNOT1-221ENST00000569924 RNFT2Q96EX2 444 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms