RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 RAI2Q9Y5P3 530 aa13.28□□□□□ -0.28
SPG7-221ENST00000569720 LRRK1Q38SD2 2015 aa13.28□□□□□ -0.28
SPG7-221ENST00000569720 RP1P56715 2156 aa13.28□□□□□ -0.28
SPG7-221ENST00000569720 ANKRD36A6QL64 1941 aa13.27□□□□□ -0.28
SPG7-221ENST00000569720 EME2A4GXA9 379 aaPredicted RBP13.27□□□□□ -0.29
SPG7-221ENST00000569720 LGALS16A8MUM7 142 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 WASH4PA8MWX3 477 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 ATXN7O15265 892 aaPredicted RBP13.27□□□□□ -0.29
SPG7-221ENST00000569720 DXOO77932 396 aaKnown RBP13.27□□□□□ -0.29
SPG7-221ENST00000569720 TGM2P21980 687 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 HTR7P34969 479 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 IGFALSP35858 605 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.29
SPG7-221ENST00000569720 BLKP51451 505 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 UCNP55089 124 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 ADKP55263 362 aaKnown RBP13.27□□□□□ -0.29
SPG7-221ENST00000569720 UBASH3AP57075 661 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 ERVPABLB-1P60509 514 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 CXADRP78310 365 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 FANCCQ00597 558 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 PPARDQ03181 441 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 TLE3Q04726 772 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 C19orf57Q0VDD7 668 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 SERINC3Q13530 473 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 ISXQ2M1V0 245 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 PRRT3Q5FWE3 981 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 TPRG1LQ5T0D9 272 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 CFAP58Q5T655 872 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 ESRP1Q6NXG1 681 aaKnown RBP13.27□□□□□ -0.29
SPG7-221ENST00000569720 PPP1R2P3Q6NXS1 205 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 GUSBP11Q6P575 273 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 MACC1Q6ZN28 852 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 RBM44Q6ZP01 1051 aaKnown RBP13.27□□□□□ -0.29
SPG7-221ENST00000569720 DNAAF5Q86Y56 855 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 PHACTR4Q8IZ21 702 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 RBFAQ8N0V3 343 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 UMODL1-AS1Q8N2C9 162 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 RNF214Q8ND24 703 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 WDR48Q8TAF3 677 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 HCAR2Q8TDS4 363 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 SCG3Q8WXD2 468 aaKnown RBP13.27□□□□□ -0.29
SPG7-221ENST00000569720 SLC39A7Q92504 469 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 NAT6Q93015 286 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 HMCESQ96FZ2 354 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 NOL6Q9H6R4 1146 aaKnown RBP13.27□□□□□ -0.29
SPG7-221ENST00000569720 THSD1Q9NS62 852 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 UBA2Q9UBT2 640 aaPredicted RBP13.27□□□□□ -0.29
SPG7-221ENST00000569720 DOLKQ9UPQ8 538 aa13.27□□□□□ -0.29
SPG7-221ENST00000569720 A0A1B0GTH6 734 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 A0A1W2PQC6 194 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 TMEM110-MUSTN1A8MSY1 372 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 LMO7DNF2Z398 122 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 MUSKO15146 869 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 LZTS3O60299 673 aaPredicted RBP13.26□□□□□ -0.29
SPG7-221ENST00000569720 TCEA3O75764 348 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 TIMP2P16035 220 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 FERP16591 822 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 RBMS1P29558 406 aaKnown RBP13.26□□□□□ -0.29
SPG7-221ENST00000569720 PEX5P50542 639 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 TPI1P60174 286 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 RPL7AP62424 266 aaKnown RBP13.26□□□□□ -0.29
SPG7-221ENST00000569720 NR1I3Q14994 352 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 LRRC14Q15048 493 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 ELOCQ15369 112 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 TMEM52BQ4KMG9 183 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 C6orf132Q5T0Z8 1188 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 ERAP2Q6P179 960 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 FSTL5Q8N475 847 aaPredicted RBP13.26□□□□□ -0.29
SPG7-221ENST00000569720 TP53I13Q8NBR0 393 aaPredicted RBP13.26□□□□□ -0.29
SPG7-221ENST00000569720 KCNE4Q8WWG9 221 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 VOPP1Q96AW1 172 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 NAF1Q96HR8 494 aaKnown RBP13.26□□□□□ -0.29
SPG7-221ENST00000569720 ERGIC2Q96RQ1 377 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 WRAP53Q9BUR4 548 aaKnown RBP13.26□□□□□ -0.29
SPG7-221ENST00000569720 LRRC61Q9BV99 259 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 BOCQ9BWV1 1114 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 KLC2Q9H0B6 622 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 RTN4Q9NQC3 1192 aaKnown RBP13.26□□□□□ -0.29
SPG7-221ENST00000569720 LHX3Q9UBR4 397 aa13.26□□□□□ -0.29
SPG7-221ENST00000569720 GCATO75600 419 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 ALPIP09923 528 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 CTSEP14091 401 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 TSHRP16473 764 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 HTR1BP28222 390 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 TMPRSS3P57727 454 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 C1orf61Q13536 156 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 IRF4Q15306 451 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 CYTH1Q15438 398 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 C3orf38Q5JPI3 329 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 ACAD10Q6JQN1 1059 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 BRAT1Q6PJG6 821 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 IGF2-ASQ6U949 168 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 SLC35F3Q8IY50 421 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 MCOLN2Q8IZK6 566 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 NETO2Q8NC67 525 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 ATL2Q8NHH9 583 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 MRFAP1L1Q96HT8 127 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 HIC2Q96JB3 615 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 EXOC2Q96KP1 924 aa13.25□□□□□ -0.29
SPG7-221ENST00000569720 ZNF641Q96N77 438 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms