RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 TCRBV7S2A1N4TA0A589 114 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 H0Y858 1186 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 PTPRAP18433 802 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 CYP2C18P33260 490 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 GCLMP48507 274 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 VAMP7P51809 220 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 MAPK12P53778 367 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 HADHBP55084 474 aaKnown RBP10.93□□□□□ -0.66
CLK3-226ENST00000569406 TMEM132BQ14DG7 1078 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 TBRG1Q3YBR2 411 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 ATF7IP2Q5U623 682 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 KIAA0408Q6ZU52 694 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 FAM71AQ8IYT1 594 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 OR6P1Q8NGX9 317 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 CD101Q93033 1021 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 SAMD11Q96NU1 681 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 RMDN3Q96TC7 470 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 TSEN34Q9BSV6 310 aaKnown RBP10.93□□□□□ -0.66
CLK3-226ENST00000569406 TNFRSF10DQ9UBN6 386 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 NXF1Q9UBU9 619 aaKnown RBP10.93□□□□□ -0.66
CLK3-226ENST00000569406 VWA7Q9Y334 891 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 COQ4Q9Y3A0 265 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 NUPL2O15504 423 aaKnown RBP10.93□□□□□ -0.66
CLK3-226ENST00000569406 PEX10O60683 326 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 EDN1P05305 212 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 CTNNA2P26232 953 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 MARCKSL1P49006 195 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 VBP1P61758 197 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 BNIP2Q12982 314 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 ZNF124Q15973 351 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 VARS2Q5ST30 1063 aaKnown RBP10.93□□□□□ -0.66
CLK3-226ENST00000569406 KIAA1841Q6NSI8 718 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 SYTL1Q8IYJ3 562 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 BTBD6Q96KE9 485 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 WWP1Q9H0M0 922 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 R3HDMLQ9H3Y0 253 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 SLA2Q9H6Q3 261 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 TMEM216Q9P0N5 145 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 PCYOX1Q9UHG3 505 aa10.93□□□□□ -0.66
CLK3-226ENST00000569406 E5RJQ4 531 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 TP73O15350 636 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 PIK3R1P27986 724 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 BACE1P56817 501 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 PLIN5Q00G26 463 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 BAATQ14032 418 aaPredicted RBP10.92□□□□□ -0.66
CLK3-226ENST00000569406 FLOT2Q14254 428 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 KCTD8Q6ZWB6 473 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 STK32CQ86UX6 486 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 MAP4K3Q8IVH8 894 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 MICALL2Q8IY33 904 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 RNF148Q8N7C7 305 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 ZNF565Q8N9K5 539 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 TRPM4Q8TD43 1214 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 FNIP1Q8TF40 1166 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 FAM149B1Q96BN6 582 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 SIPA1Q96FS4 1042 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 COQ10BQ9H8M1 238 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 TOPORSQ9NS56 1045 aaPredicted RBP10.92□□□□□ -0.66
CLK3-226ENST00000569406 ADGRE2Q9UHX3 823 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 ENPP5Q9UJA9 477 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 CACNG2Q9Y698 323 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 GAS2O43903 313 aaKnown RBP10.92□□□□□ -0.66
CLK3-226ENST00000569406 TCEA3O75764 348 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 SGPL1O95470 568 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 GMPSP49915 693 aaPredicted RBP10.92□□□□□ -0.66
CLK3-226ENST00000569406 GALNT2Q10471 571 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 TARDBPQ13148 414 aaKnown RBP eCLIP10.92□□□□□ -0.663e-6■■■□□ 14.6
CLK3-226ENST00000569406 PPP2R5DQ14738 602 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 SGCAQ16586 387 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 C15orf39Q6ZRI6 1047 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 LILRA2Q8N149 483 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 RFFLQ8WZ73 363 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 ZNF516Q92618 1163 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 NELL1Q92832 810 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 TESCQ96BS2 214 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 EFHD1Q9BUP0 239 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 CPNE5Q9HCH3 593 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 TBC1D22BQ9NU19 505 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 PIM2Q9P1W9 311 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 TBX20Q9UMR3 447 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 ZNF541Q9H0D2 1346 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 CALCAP01258 141 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 FTLP02792 175 aaPredicted RBP10.92□□□□□ -0.66
CLK3-226ENST00000569406 PDGFAP04085 211 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 DLATP10515 647 aaKnown RBP10.92□□□□□ -0.66
CLK3-226ENST00000569406 HOXB1P14653 301 aaPredicted RBP10.92□□□□□ -0.66
CLK3-226ENST00000569406 ATF2P15336 505 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 ERVK-21P61565 698 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 TGFB2P61812 414 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 LEXMQ3ZCV2 418 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 ERAP2Q6P179 960 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 PTAR1Q7Z6K3 402 aaPredicted RBP10.92□□□□□ -0.66
CLK3-226ENST00000569406 SLC47A2Q86VL8 602 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 METTL23Q86XA0 190 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 ZNF354CQ86Y25 554 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 FBXW8Q8N3Y1 598 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 ZNF668Q96K58 619 aaPredicted RBP10.92□□□□□ -0.66
CLK3-226ENST00000569406 DACH2Q96NX9 599 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 C12orf57Q99622 126 aa10.92□□□□□ -0.66
CLK3-226ENST00000569406 C1orf21Q9H246 121 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms