RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CSRP2Q16527 193 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 PARP6Q2NL67 630 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 N4BP2L1Q5TBK1 243 aaPredicted RBP16.2■□□□□ 0.18
USB1-215ENST00000569252 TCEAL6Q6IPX3 200 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 ANO7Q6IWH7 933 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 NCEH1Q6PIU2 408 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 CEP68Q76N32 757 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 MAATS1Q7Z4T9 603 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 PGBD5Q8N414 524 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 CEP112Q8N8E3 955 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 CHST14Q8NCH0 376 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 SPATA4Q8NEY3 305 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 PIP4K2CQ8TBX8 421 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 CCHCR1Q8TD31 782 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 PDCD6IPQ8WUM4 868 aaKnown RBP16.2■□□□□ 0.18
USB1-215ENST00000569252 TCEAL3Q969E4 200 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 IFT43Q96FT9 208 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 HHIPQ96QV1 700 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 FAM129BQ96TA1 746 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 SUV39H2Q9H5I1 410 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 NOD2Q9HC29 1040 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 PPM1HQ9ULR3 514 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 SPAG17Q6Q759 2223 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 IGF2RP11717 2491 aa16.2■□□□□ 0.18
USB1-215ENST00000569252 CHD5Q8TDI0 1954 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 NYNRINQ9P2P1 1898 aaKnown RBP16.19■□□□□ 0.18
USB1-215ENST00000569252 E7EVH7 732 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 MUSKO15146 869 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 PSMD3O43242 534 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 UGT2B4P06133 528 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 CD86P42081 329 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 RPS14P62263 151 aaKnown RBP16.19■□□□□ 0.18
USB1-215ENST00000569252 DSC2Q02487 901 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 CST6Q15828 149 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 FBXL19Q6PCT2 694 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 KBTBD6Q86V97 674 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 LONP2Q86WA8 852 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 CNTD1Q8N815 330 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 HCAR2Q8TDS4 363 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 FCRL5Q96RD9 977 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 DDX47Q9H0S4 455 aaKnown RBP16.19■□□□□ 0.18
USB1-215ENST00000569252 FAM153AQ9UHL3 310 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 MRFAP1Q9Y605 127 aa16.19■□□□□ 0.18
USB1-215ENST00000569252 ZFYVE26Q68DK2 2539 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 TTC24A2A3L6 582 aaPredicted RBP16.18■□□□□ 0.18
USB1-215ENST00000569252 CTAGE15A4D2H0 777 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 PDE2AO00408 941 aaPredicted RBP16.18■□□□□ 0.18
USB1-215ENST00000569252 ZNF217O75362 1048 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 PAPSS2O95340 614 aaPredicted RBP16.18■□□□□ 0.18
USB1-215ENST00000569252 KRT14P02533 472 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 CTAGE8P0CG41 777 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 CHRM1P11229 460 aaPredicted RBP16.18■□□□□ 0.18
USB1-215ENST00000569252 NFKB1P19838 968 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 OXTRP30559 389 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 GKP32189 559 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 FDFT1P37268 417 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 RGRP47804 291 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 COPAP53621 1224 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 EPHB1P54762 984 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 GEMP55040 296 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 DR1Q01658 176 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 AASDHQ4L235 1098 aaPredicted RBP16.18■□□□□ 0.18
USB1-215ENST00000569252 USP39Q53GS9 565 aaKnown RBP16.18■□□□□ 0.18
USB1-215ENST00000569252 ZNF805Q5CZA5 627 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 ARMC12Q5T9G4 340 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 SYDE1Q6ZW31 735 aaPredicted RBP16.18■□□□□ 0.18
USB1-215ENST00000569252 TTC7BQ86TV6 843 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 CTAGE6Q86UF2 777 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 CAMK1DQ8IU85 385 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 CTAGE4Q8IX94 777 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 HDDC3Q8N4P3 179 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 RTP4Q96DX8 246 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 IMP4Q96G21 291 aaKnown RBP16.18■□□□□ 0.18
USB1-215ENST00000569252 MRGPRX1Q96LB2 322 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 KLHL32Q96NJ5 620 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 RBM15Q96T37 977 aaKnown RBP eCLIP16.18■□□□□ 0.18
USB1-215ENST00000569252 KRT12Q99456 494 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 ADGRE3Q9BY15 652 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 MKRN2Q9H000 416 aaKnown RBP16.18■□□□□ 0.18
USB1-215ENST00000569252 GBA3Q9H227 469 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 VPS45Q9NRW7 570 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 EBF1Q9UH73 591 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 PCYOX1Q9UHG3 505 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 PCDHGC4Q9Y5F7 938 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 RAI2Q9Y5P3 530 aa16.18■□□□□ 0.18
USB1-215ENST00000569252 MID1O15344 667 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 SOCS5O75159 536 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 RNASEH2AO75792 299 aaKnown RBP16.17■□□□□ 0.18
USB1-215ENST00000569252 GABRG2P18507 467 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 NDUFV2P19404 249 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 CR2P20023 1033 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 GDF10P55107 478 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 MPP3Q13368 585 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 DHX34Q14147 1143 aaKnown RBP16.17■□□□□ 0.18
USB1-215ENST00000569252 POM121L1PQ3SYA9 428 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 ALG1LQ6GMV1 187 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 BRAT1Q6PJG6 821 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 CACUL1Q86Y37 369 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 FSD1LQ9BXM9 530 aa16.17■□□□□ 0.18
USB1-215ENST00000569252 PABPC3Q9H361 631 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms